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Domain assignment for XP_004985419.1.39314 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_004985419.1.39314
Domain Number 1 Region: 87-239,296-402,461-559
Classification Level Classification E-value
Superfamily RNI-like 1.96e-27
Family Rna1p (RanGAP1), N-terminal domain 0.061
Further Details:      
 
Domain Number 2 Region: 26-54
Classification Level Classification E-value
Superfamily F-box domain 0.0000458
Family F-box domain 0.0051
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_004985419.1.39314
Sequence length 597
Comment PREDICTED: transport inhibitor response 1-like protein [Setaria italica]; AA=GCF_000263155.2; RF=representative genome; TAX=4555; STAX=4555; NAME=Setaria italica; strain=Yugu1; AL=Chromosome; RT=Major
Sequence
MSEEDEDQPPPKRPSASPPADQVLGNVLETVLQFLDAPRDRSAASLVCRSWHRAESATRE
AVAVRNLLAASAARTARRFPNARTLLLKGRPRFADFNLLPHGWDASAFRPWAAAIAAGAF
PALASLYLKRIPVTDADLDLLSRSLPASFRDLSLHLCDGFSSRGLASIASHCRALRVLDV
VECDMAEEQEVVDWVAAFRPEPTNLESLSFECYEQPVSFAALEALVARSPRLTRLGVNQH
ISLGQLRRLMAHAPRLSHLGTGSFRPADGGEEGVGFGEVLAAFDSAGRARTLVSLSGFRE
LAQEYLPTITVVCSNLKSLDLSYTPVTPNQILMFIGQCYNLETLWVLDSVRDEGLGNVAI
SCKKLKCLRVLPLNAHEDADELVSEVGLTAISQGCPELRSILYFCQTMTNAAVIAMSRNC
PELKVFRLCIMGRHQPDHATGEPMDEGFGAIVQNCSKLTRLSTSGHLTDRAFEYIGRYGK
SLRTLSVAFAGNSDVALQYILQGCSKLEKLEIRDCPFGDAGLLSGMHHFYNMRFVWMSGC
NLTLQGCKEVARGLPRMVVELINGQPENERTEKVDILYMYRSLDGPREDVPSFVKIL
Download sequence
Identical sequences K4A7E0
Si034796m|PACid:19682923 XP_004985419.1.39314

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