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Domain assignment for XP_005029697.2.99704 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_005029697.2.99704
Domain Number 1 Region: 467-677
Classification Level Classification E-value
Superfamily TPR-like 1.43e-36
Family Tetratricopeptide repeat (TPR) 0.0043
Further Details:      
 
Domain Number 2 Region: 879-1072
Classification Level Classification E-value
Superfamily TPR-like 1.71e-33
Family Tetratricopeptide repeat (TPR) 0.009
Further Details:      
 
Domain Number 3 Region: 27-136
Classification Level Classification E-value
Superfamily TPR-like 1.1e-32
Family Tetratricopeptide repeat (TPR) 0.00084
Further Details:      
 
Domain Number 4 Region: 275-476
Classification Level Classification E-value
Superfamily TPR-like 1.17e-31
Family Tetratricopeptide repeat (TPR) 0.0065
Further Details:      
 
Domain Number 5 Region: 678-877
Classification Level Classification E-value
Superfamily TPR-like 2.84e-31
Family Tetratricopeptide repeat (TPR) 0.0092
Further Details:      
 
Domain Number 6 Region: 205-310
Classification Level Classification E-value
Superfamily TPR-like 0.00000000000252
Family Tetratricopeptide repeat (TPR) 0.018
Further Details:      
 
Domain Number 7 Region: 1047-1170
Classification Level Classification E-value
Superfamily TPR-like 0.00000548
Family Tetratricopeptide repeat (TPR) 0.021
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_005029697.2.99704
Sequence length 2438
Comment PREDICTED: tetratricopeptide repeat protein 28 [Anas platyrhynchos]; AA=GCF_000355885.1; RF=representative genome; TAX=8839; STAX=8839; NAME=Anas platyrhynchos; breed=Pekin duck; AL=Scaffold; RT=Major
Sequence
MISFFGSKSFGRRSPDSPMLSKAEFVEKVRQSNQACHDGDFHTAIVLYNEALGVDPQNCI
LYSNRSAAYMKIQQYDKALDDAIKARLLNPKWPKAYFRQGVALQYLGRHADALAAFASGL
AQDPKSLQLLVGMVEAAMKSPMRESLEPTYQQLQKMKLDKSPFVVVSVIGQELLTAGHHG
ASVVVLEAALKIGTCSLKLRGSVFSALSSAYWSLGNTEKSTGYMQQDLDVAKTLGDQTGE
CRAHGNLGSAFFSKGNYREALTNHRHQLVLAMKLKDREAASSALSSLGHVYTAIGDYPNA
LASHKQCVLLAKQSKDELSEARELGNMGAVYIAMGDFENAVQCHEQHLKIAKELGNKREE
ARAYSNLGSAYHYRRNFDKAMSYHNYVLELAQELAEKAIEMRAYAGLGHAARCMQDLERA
KQYHEEQLHIAESLQDRAAEGRASSNLGIIHQMKGDYDTALRLHKTHLSIAQELSDYAAQ
GRAYGNMGNAYNALGMYDQAVKYHRQELQISMEVNDRASQASTHGNLAVAYQALGAHDRA
LQHYQNHLNIARELRDIQSEARALSNLGNFHCSRGEFVQAAPYYEQYLRLSPELQDMEGE
GKVCHNLGYAHYCLGNYEEAVKYYEQDLALAKDLHDKLSQAKAYCNLGLAFKALMDFSKA
EECQKYLLSLAQSLNNSQAKFRALGNLGDIFVCKKDISGAIKFYEQQLSLAHHVTDRRLE
ASAYAALGSAYRMIQKCDKALGYHTQELEVYQELGDVSGECRAHGHLAAVYMSLGKYTMA
FKCYEEQLDLGQKLKDPSIEAQVYGNMGITKMNMNVMEEAIGYFEQQLAMLQQLSGNESV
LDRGRAYGNLGDCYEALGDFEEAIKYYEQYLSVAQSLNRMQDQAKAYRGLGNGHRAMGSL
QQALVCFEKRLVVAHELGEAFNKAQAYGELGSLHSQLGNYEQAISCLERQLNIAREMKDR
ALESDAACGLGGVYQQMGEYDTALQYHQLDLQIAEETNNPTCQGRAYGNLGLTYESLGTY
ERAVVYQEQHLSIAAQMNDLVAKTVSYSSLGRTHHALQNYSQAVMYLQEGLRLAEQLGRR
EDEAKIRHGLGLSLWASGNLEESQHQLYRASALFETIRHEVQLSTDYKLSLFDLQTSSYQ
ALQRVLVSLGHHDEALAVAERGRTRAFADLLVERQTGQQDSDPYSPVTIDQVLETVNGQR
GLVLYYSLAAGYLYSWLLAPGAGILKFHEYYLGDSVTENAGDFPEANSVTLQTVTNSALE
QYVSSVREALGVDSYYTRACASSETESEAGDIMDQQYEEMNNKLNSVTDPTGFLRMVSRN
NLLNRSCQSMTSLFSSTMSPVKDGTSSLPRRQTSFSKPPLRALYDLLIGPLEGGLMHSSG
PVGRHRQLILVLEGELYLIPFALLKGSSSNEYLYERFSLIAVPSIQSLNPSSKSHVRKST
PAYSSSTSMAAVIGNPKLPSAVMDRWLWGPMPSAEEEAFMVSELLGCQPLVGSAATKERV
MSALTQAECVHFATHVSWKLAALVLTPNTDSNPVSSKSSFGNPYTIPESLRMQDDASDVE
SISDCPPLQEFLLTAADVLDLRLPVKLVVLGSYQESNSKVTADGVIGLTRAFLAAGTQCV
LVSLWPVPVAASKMFVHAFYSSLLNGMKASAALGEAMKTVQSSKQFSHPSNWAGFMLIGS
DMKLNSPSSLVGQALTEILQHPERARDALRVLLHLVEKSLQRIQNGQHNSMYTSQQSVEN
KVGGIPGWQALLTAVGFRLDPPASGLPAAVFFPTSDPGERLQQCSTTIQSLLGLPNPALQ
ALCKLITASETGEQLINRLHQVLVQLQAGEKEQDFSSAPIQVSISVQLWRLPGCHEFLAA
LGFDLCEVGQEEVILKTGKQANRRTMHFALQSLLALFDSTELPKRLSLDSSSSLESLASA
QSISNPVPQYQNPPFSPTCPDSIASDAISVYSLSSIASSMSFVSKPESMPDGVGHRGRQD
YERPKNIYLHRPAIQSQLSPQTSTVASKDEEEYEGFSIISNEPLASYQENIKTRFSPDNK
HPQTGQTGGIKELVNSKGSISTPNSPVKMTLIPSPNSPFQKVGKLASSDTGESDQSSTET
DSTVKSQEDSNPKLDPQELAQKILEETQSHLIAVERLQRSSSQINKSKNSDDAASVPAGI
SAFRSSETSAFSRPISSSQKNQSSPVAIKPKPPTRSSSLQKVSSGYNSPTTSEMSNKEGT
GQYSGQPSPSCDLHGSLTEQPHFKLKYPSSPYSAHISKSPRNLSPSSGHQSPGGSTPSPA
LSYSSAGSARSSPADAPDIDKLKMAAIDEKVQAIHNLKMFWQNTPQHSTGPIKILRGAPG
TMTSKKDVLSLLNLSPRHSKEESADKLELKDLSIEQQLASPQKNPPNGHRHPETPNAVTS
AHSPPSSSTPGTVLPLRLPSGNGYKFLSPGRFFPSSKC
Download sequence
Identical sequences XP_005029697.2.99704

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