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Domain assignment for XP_005055049.1.66865 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_005055049.1.66865
Domain Number 1 Region: 455-659
Classification Level Classification E-value
Superfamily TPR-like 7.05e-36
Family Tetratricopeptide repeat (TPR) 0.0043
Further Details:      
 
Domain Number 2 Region: 659-858
Classification Level Classification E-value
Superfamily TPR-like 3.41e-33
Family Tetratricopeptide repeat (TPR) 0.0092
Further Details:      
 
Domain Number 3 Region: 860-1057
Classification Level Classification E-value
Superfamily TPR-like 5.31e-33
Family Tetratricopeptide repeat (TPR) 0.0096
Further Details:      
 
Domain Number 4 Region: 9-118
Classification Level Classification E-value
Superfamily TPR-like 4.22e-32
Family Tetratricopeptide repeat (TPR) 0.00086
Further Details:      
 
Domain Number 5 Region: 257-458
Classification Level Classification E-value
Superfamily TPR-like 7.86e-32
Family Tetratricopeptide repeat (TPR) 0.0065
Further Details:      
 
Domain Number 6 Region: 187-292
Classification Level Classification E-value
Superfamily TPR-like 0.00000000000209
Family Tetratricopeptide repeat (TPR) 0.013
Further Details:      
 
Domain Number 7 Region: 1029-1152
Classification Level Classification E-value
Superfamily TPR-like 0.00000835
Family Tetratricopeptide repeat (TPR) 0.052
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_005055049.1.66865
Sequence length 2419
Comment PREDICTED: tetratricopeptide repeat protein 28 isoform X1 [Ficedula albicollis]; AA=GCF_000247815.1; RF=representative genome; TAX=59894; STAX=59894; NAME=Ficedula albicollis; AL=Chromosome; RT=Major
Sequence
MLSKAEFVEKVRQSNQACHDGDFHMAIVLYNEALGVDPQNCILYSNRSAAYMKIHQYDKA
LDDAIKARLLNPKWPKAYFRQGVALQYLGRHADALAAFASGLAQDPKSLQLLVGMVEAAM
KSPMRESLEPTYQQLQKMKLDKSPFVVVSVIGQELLTAGHHGASVVVLEAALKIGTCSLK
LRGSVFSALSSAYWSLGNTEKSTGYMQQDLDVAKSLGDQTGECRAHGNLGSAFFSKGNYR
EALTNHRHQLVLAMKLKDREAASSALSSLGHVYTAIGDYPNALASHKQCVLLAKQSKDEL
SEARELGNMGAVYIAMGDFENAVQCHEQHLKIAKELGNKREEARAYSNLGSAYHYRRNFD
KAMSYHNYVLELAQELAEKAIEMRAYAGLGHAARCMQDLERAKQYHEEQLHIAESLQDRA
AEGRASSNLGIIHQMKGDYDTALRLHKTHLSIAQELSDYAAQGRAYGNMGNAYNALGMYD
QAVKFHRQELQISMEVNDRASQASTHGNLAVAYQALGAHDRALQHYQNHLNIARELRDIQ
SEARALSNLGNFHCTRGEFVQAAPYYEQYLRLSPELQDMEGEGKVCHNLGYAHYCLGNYE
EAVKYYEQDLALAKDLHDKLSQAKAYCNLGLAFKALMDFNKAEECQKYLLSLAQSLNNSQ
AKFRALGNLGDIFVCKKDVHGAIKFYEQQLSLAHQVKDRRLEANAYAALGSAYRMVQKCD
KALGYHTQELEVYQELGDMSGECRAHGHLAAVYMSLGKYTMAFKCYEEQLELGQKLKDPS
IEAQVYGNMGITKMNMNVMEEAIGYFEQQLAMLQQLSGNESVLDRGRAYGNLGDCYEALG
DFEEAIKYYEQYLSVAQSLNRMQDQAKAYRGLGSGHRAMGSLQQALVCFEKRLVVAHELG
EAFNKAQAYGELGSLHSQLGNYEQAISCLERQLNIAREMKDRALESDAACGLGGVYQQMG
EYETALQYHQLDLQIAEETSNPAGQGRAYGNLGLTYESLGTYERAVVYQEQHLSIAAQMN
DLVAKTVSYSSLGRTHHALQNYSQAVMYLQEGLRLAEQLGRREDEAKIRHGLGLSLWASG
NLEESQHQLYRASALFETIRHEVQLSTDYKLSLFDLQTSSYQALQRVLVSLGHHDEALAV
AERGRTRAFADLLVERQTGQQDSDPYSPVTLDQVLETVNGQRGLVLYYSLAAGYLYSWLL
APGAGILKFHEYYLGDSLAENAGDFHEANSVALQTLANSALEQHISSVREALGVDSYYTR
ACASSETESEAGDIMDQQFEEMNNKLNSMTDPTGFLRMVSRNNLLNRSCQSMTSLFSSTM
SPVKDGTSSLPRRQTSFSKPPLRALYDLLIGPMEGGLMHSSGPVGRHRQLVLVLEGELYL
IPFALLKGSSSNEYLYERFSLIAVPSIQSLNPSSKSHVRKNTPAYSSSTSMAAVIGNPKL
PPAVMDRWLWGPMPSAEEEAYMVSELLGCQPLVGSSSTKERVMSALTQAECVHFATHVSW
KLSALVLTPNTDSNPASSKSSFGNPYTIPESLRMQDDASDVESISDCPPLQEFLLTAADV
LDLRLPVKLVVLGSYQESNSKVTSDGVIGLTRAFLAAGAQCVLVSLWPIPVAASKMFVHA
FYSSLLNGLKASAALGEAMKTVQSSKQFSHPANWAGFMLIGSDMKLNSPSSLVGQALTEI
LQHPERARDALRVLLHLVEKSLQRIQNGQHNSMYTSQQSVENKVGGIPGWQALLTAVGFR
LDPPASGLPAAVFFPTSDPGDRLQQCSTTIQSLLGLPNPALQALCKLITASETGEQLINR
LHQVLVQLQAGEKEQDFPSAPIQVSISVQLWRLPGCHEFLAALGFDLCEVGQEEVILKTG
KQATRRTMHFALQSLLALFDSTELPKRLSLDSSSSLESLASAQSVSNPVPQYQNPPFSPT
CPDSIASDAISVYSLSSIASSMSFVSKPENMLDGAGHRGRQDYERPKNIYPHRSAAQSQL
SPQATAASKDEEEYEGFSIISNEPLASYQENIKPRFSPDHKQPKTSQNGGIKVSINSKGS
ISTPNSPVKMTLIPSPNSPFQKVGKLASSDTGESDQSSTETDSTVKSQEDSNPKLDPQEL
AQKILEETQSHLIAVERLQRSSSQVSRSTSSDDGAASPAGISAFRSSETSAFSRPLSSGQ
RNQPSPLAMKPKPPTRSSSLQKVSSGYNSPTASEMSNREDTGQYSGQPSPGCDSHGSLTE
QPPFKLKYPSSPYSAHISKSPRNISPSSGHQSPGGSTPSPALSYSSAGSARSSPADAPDI
DKLKLAAIDEKVQAIHNLKMFWQSTPHHASGPIKILRGAPGTMTSKKDVLSLLNLSPRHS
KEESGEKLELKDLSVGQHLAASPQKIPPNGHRRPETTNAVTSAHSSPGNTLGAVRPLRLP
AGNGYKFLSPGRFFPSSKC
Download sequence
Identical sequences U3K133
ENSFALP00000008737 XP_005055049.1.66865

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