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Domain assignment for XP_005336016.1.77405 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_005336016.1.77405
Domain Number 1 Region: 30-227
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 5.25e-38
Family Laminin G-like module 0.0017
Further Details:      
 
Domain Number 2 Region: 267-333
Classification Level Classification E-value
Superfamily FnI-like domain 0.0000000000262
Family VWC domain 0.012
Further Details:      
 
Domain Number 3 Region: 476-584
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.0000000000643
Family Growth factor receptor domain 0.0091
Further Details:      
 
Domain Number 4 Region: 682-754
Classification Level Classification E-value
Superfamily FnI-like domain 0.00000000555
Family VWC domain 0.024
Further Details:      
 
Domain Number 5 Region: 427-468
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000322
Family EGF-type module 0.014
Further Details:      
 
Domain Number 6 Region: 589-631
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000123
Family EGF-type module 0.02
Further Details:      
 
Domain Number 7 Region: 334-391
Classification Level Classification E-value
Superfamily FnI-like domain 0.00000596
Family VWC domain 0.031
Further Details:      
 
Weak hits

Sequence:  XP_005336016.1.77405
Domain Number - Region: 392-426
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00758
Family EGF-type module 0.033
Further Details:      
 
Domain Number - Region: 624-687
Classification Level Classification E-value
Superfamily FnI-like domain 0.0115
Family VWC domain 0.025
Further Details:      
 
Domain Number - Region: 765-802
Classification Level Classification E-value
Superfamily FnI-like domain 0.0774
Family VWC domain 0.07
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_005336016.1.77405
Sequence length 810
Comment protein kinase C-binding protein NELL1 isoform X1 [Ictidomys tridecemlineatus]; AA=GCF_000236235.1; RF=representative genome; TAX=43179; STAX=43179; NAME=Ictidomys tridecemlineatus; AL=Scaffold; RT=Major
Sequence
MPMDVILVLWFCVCTARTVVGFGMDPDLQMDFITELDLVNTTFGVTQVSGLHNASKAFLF
QDTEREIHAAPHVSEKLIQLFRNKSEFTFLATVQQKPSTSGVILSIRELEHSYFELESSG
LRDEIRYHYIHKGKPRTEALPYRMADGQWHKVALSVSASHLLLHVDCNRIYERVIDTPET
NLPPGSNLWLGQRNQKHGLFKGIIQDGKIIFMPNGYITQCPNLNRTCPTCSDFLSLVQGI
MDLQELLAKMTAKLNYAETRLSQLENCHCEKTCQVSGLLYRDQDSWVDGDHCRNCTCKSG
AVECRRMSCPPLNCSSESLPVHIAGQCCKVCRPKCIYGGRVLAEGQRILTKSCRECRGGV
LVKITEMCPPLNCSEKDHILPENQCCSVCRGHNFCAEAPKCGENSECKNWNTKATCECKN
GYISIQGDSAYCEDIDECAAKMHYCHANTVCVNLPGLYRCDCVPGYIRVDDFSCTEHDEC
GSGQHNCDENAICTNTVQGHSCTCKPGYVGNGTICKAFCEEGCRYGGTCVAPNKCVCPPG
FTGSHCEKDIDECTEGIIECHNHSRCVNLPGWYHCECRSGFHDDGTYSLSGESCIDIDEC
ALRTHTCWNDSACINLAGGFDCLCPSGPSCSGDCPHEGGLKHNGQVWTLKEDRCSVCSCK
DGKIFCRRTACDCQNPSVDLFCCPECDTRVTSQCLDQNGHKLYRSGDNWTHSCQQCRCLE
GEVDCWPLACPNLSCEYTAMVEGECCPRCVSDPCLADHIAYDIRKTCLDSYGVSRLSGAV
WTMAGSPCTTCKCKNGRVCCSVDLECLQNN
Download sequence
Identical sequences I3MH09
ENSSTOP00000010123 XP_005336016.1.77405 ENSSTOP00000010123

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