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Domain assignment for XP_005343289.1.66349 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_005343289.1.66349
Domain Number 1 Region: 29-279
Classification Level Classification E-value
Superfamily Calponin-homology domain, CH-domain 4.18e-93
Family Calponin-homology domain, CH-domain 0.00000302
Further Details:      
 
Domain Number 2 Region: 295-416
Classification Level Classification E-value
Superfamily Spectrin repeat 2.09e-33
Family Spectrin repeat 0.0000925
Further Details:      
 
Domain Number 3 Region: 2173-2292
Classification Level Classification E-value
Superfamily PH domain-like 9.53e-33
Family Pleckstrin-homology domain (PH domain) 0.0000195
Further Details:      
 
Domain Number 4 Region: 1640-1793
Classification Level Classification E-value
Superfamily Spectrin repeat 3.36e-30
Family Spectrin repeat 0.001
Further Details:      
 
Domain Number 5 Region: 1009-1164
Classification Level Classification E-value
Superfamily Spectrin repeat 7.86e-30
Family Spectrin repeat 0.00000447
Further Details:      
 
Domain Number 6 Region: 1851-2005
Classification Level Classification E-value
Superfamily Spectrin repeat 6.55e-28
Family Spectrin repeat 0.002
Further Details:      
 
Domain Number 7 Region: 1532-1687
Classification Level Classification E-value
Superfamily Spectrin repeat 2.95e-27
Family Spectrin repeat 0.0027
Further Details:      
 
Domain Number 8 Region: 639-742
Classification Level Classification E-value
Superfamily Spectrin repeat 1.8e-25
Family Spectrin repeat 0.00026
Further Details:      
 
Domain Number 9 Region: 1229-1375
Classification Level Classification E-value
Superfamily Spectrin repeat 7.92e-25
Family Spectrin repeat 0.001
Further Details:      
 
Domain Number 10 Region: 815-950
Classification Level Classification E-value
Superfamily Spectrin repeat 3.99e-24
Family Spectrin repeat 0.0027
Further Details:      
 
Domain Number 11 Region: 425-526
Classification Level Classification E-value
Superfamily Spectrin repeat 3.8e-22
Family Spectrin repeat 0.00036
Further Details:      
 
Domain Number 12 Region: 745-849
Classification Level Classification E-value
Superfamily Spectrin repeat 3.36e-19
Family Spectrin repeat 0.0014
Further Details:      
 
Domain Number 13 Region: 520-640
Classification Level Classification E-value
Superfamily Spectrin repeat 6.67e-19
Family Spectrin repeat 0.00069
Further Details:      
 
Domain Number 14 Region: 2011-2070
Classification Level Classification E-value
Superfamily Spectrin repeat 0.0000000000173
Family Spectrin repeat 0.0016
Further Details:      
 
Domain Number 15 Region: 1386-1477
Classification Level Classification E-value
Superfamily Spectrin repeat 0.000000000694
Family Spectrin repeat 0.0019
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_005343289.1.66349
Sequence length 2329
Comment PREDICTED: spectrin beta chain, erythrocytic isoform X1 [Microtus ochrogaster]; AA=GCF_000317375.1; RF=representative genome; TAX=79684; STAX=79684; NAME=Microtus ochrogaster; AL=Chromosome; RT=Major
Sequence
MTSATEFENVGNQPPYSRINARWDAPDDELDNDNSSARLFERSRIKALADEREVVQKKTF
TKWVNSHLARVSCRISDLYKDLRDGRMLIKLLEVLSGEMLPRPTKGKMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLVLGLIWTIILRFQIQDIVVQTQEGRETRSAKDALL
LWCQMKTAGYPHVNVTNFTSSWKDGLAFNALIHKHRPDLIDFDKLKDSNARHNLEHAFDV
AERQLGIIPLLDPEDVFTENPDEKSIITYVVAFYHYFSKMKVLAVEGKRVGKVIDHAIET
EKMIEKYSGLASDLLTWIEQTINVLNSRKFANSLSGVQQQLQAFSTYRTVEKPPKFQEKG
NLEVLLFTIQSRMRANNQKVYTPHDGKLVSDINRAWESLEEAEYQRELALRSELIRQEKL
EQLARRFDRKAAMRETWLNENQRLVTQDNFGYDLAAVEAAKKKHEAIETDTAAYEERVKA
LEDLAQELEKENYHDQKRIMARKDNILRLWSYLQELLRSRRQRLEATLALQKLFQDMLHS
IDWMDEIKAHILSAEFGKHLLEVEDLLQKHKLMEADIAIQGDKVKAITAATLQFTEGKGY
QPCDPQVIQDRVSHLEQCFSELSNMAAGRKAQLEQSKRLWKFFWEMDEAESWIKEKEQIY
SSLDYGKDLTSVLILQRKHKAFEDELRGLDAHLKQIFQEAEGMVAQKQFGHPQIENRVKE
VSAQWDHLKELAACRKKDLQNAEDFFQFQGDADDLKAWLQDAHRLLSGEDVGQDEGATRA
LGKKHKDFLEELEESRGVMEHLEHQAQGFPEEFRDSPDVTSRLQTLQKLYQQVLAQAELR
GQRLQDALDLYTVFGESDACELWMSEKEKWLNQMDIPNTLEDLEVVQHRFDILDQEMKTL
ITQIDGVNLAANNLVESGHPRSGEVKQYQDRLNKRWQDFQAVVSEQREAVDSALRVNNYC
VDCEETSKWIVDKTKVVESIKDLGQDLAGVISIQRKLSGLERDKLAIQDRVSALQRESQH
LMESHPEQKEDIGQRQADVEKLWKGLQDALQDQELSLGEASKLQAFLQELDDFQAWLSMA
QKAVASEDMPESLPEVEQLLQQHAAIKEEIDAHEENYHQVKASGEKVIEGQRDPEYQLLG
QRLEGLDTGWDALRRMWESRGHSLTQCLGFQEFQKDAKQAEAILSNQEYTLAHLEPPDSL
AAAEAGIRKFEDFLGSMENNRHKVLSPVDSGNKLVAEGNLYSDKIKEKVQLIEDRHKKNN
EKAQEVTILLKDNLELQNFLQNCKELTLWINDKLLTSPDVSYDEARNLHNKWMKHQAFVA
ELASHQGWLENIDAEGRQLMEEKPQFKDVVSERLDALHKLWDELQTTTKAKTEQLSAARS
SDLRLQTHADLNKWIGAMEDQLRSDDLGRDLTTVNRMLAKLKRVEDQVNLRKEELEELFA
EAPLLGAEAGDTDMSIEKRFLDLLEPLGRRRKQLELSKAKLQISRDLEDEMLWVEERLPL
AQSADYGTNLQTVQLFMKKNQTLQNEILGHAPRVEDVLQRGWQLVTAPEIDCQDVEERLG
HLQGSWDTLREAAAGRLQRLRDAHEAQQYYLDAGEAEAWIGEQELYVFSDEPPKDEEGAI
VMLKRHLRQQRAVEEYGRNIKQLAGRAQNLLSAGHPEGEQIIRLQGQVDKQYAGLKDMAE
ERRRKLENMYHLFQLKREADDLEQWITEKEMVASSQEMGQDFDHVTMLRDKFRDFARETG
AIGQERVDNVNAIIERLIDAGHSEAATIAEWKDGLNDMWADLLELIDTRMQLLAASYDRH
RYFYTGTEILGLIDEKHRELPEDVGLDASTAESFHRVHTAFERELHLLGVQVQQFQDVAT
RLQTAYAGENADAIQSKEQEVSAAWQALLDACAGRRAQLVDTADKFRFFSMVRDLLSWME
SIIRQIETQERPRDVSSVELLLKYHQGIKAEINTRAKNFSTCLELGESLLQRQHQASDEI
REKLQQVVSRRQEMNDKWEARSDRLHMLLEVCQFSRDASVAEAWLIAQEPYLASRDFGHT
VDSVEKLIKRHEAFEKSTASWAERFAALEKPTTLELKERQTPERPAEEPGPQEEEGETAG
EPPQVHRAATERTSPGEERGTWPQDLQPPPLPGHHKDEQERSVGEERPATEPLFKVLDTP
LSEGDEPTTLPAQRDLGHTVQMEGYLGRKHDLEGPNKKASNRSWNNLYCVLRNSQLTFYK
DAKNLALGVPYHGEEPLALRHAICEIAANYKKKKHVFKLRLSNGSEWLFHGKDEEEMLLW
LQSMSTAINESQSIRVKAQSLPLPSLVGPDASLGKKEKEKRFSFFPKKK
Download sequence
Identical sequences XP_005343289.1.66349

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