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Domain assignment for XP_005615964.1.84170 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_005615964.1.84170
Domain Number 1 Region: 402-659
Classification Level Classification E-value
Superfamily YWTD domain 1.96e-48
Family YWTD domain 0.000000113
Further Details:      
 
Domain Number 2 Region: 32-68
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000000262
Family LDL receptor-like module 0.00075
Further Details:      
 
Domain Number 3 Region: 193-232
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000000034
Family LDL receptor-like module 0.00052
Further Details:      
 
Domain Number 4 Region: 107-147
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000000367
Family LDL receptor-like module 0.0007
Further Details:      
 
Domain Number 5 Region: 231-271
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000000406
Family LDL receptor-like module 0.00049
Further Details:      
 
Domain Number 6 Region: 66-106
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000471
Family LDL receptor-like module 0.00068
Further Details:      
 
Domain Number 7 Region: 146-184
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000013
Family LDL receptor-like module 0.00093
Further Details:      
 
Domain Number 8 Region: 316-393,660-710
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.0000000141
Family Growth factor receptor domain 0.01
Further Details:      
 
Domain Number 9 Region: 277-314
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000812
Family LDL receptor-like module 0.00036
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_005615964.1.84170
Sequence length 832
Comment PREDICTED: very low-density lipoprotein receptor isoform X2 [Canis lupus familiaris]; AA=GCF_000002285.3; RF=representative genome; TAX=9615; STAX=9612; NAME=Canis lupus familiaris; breed=boxer; AL=Chromosome; RT=Major
Sequence
MGTSARWALWLLLALCWAPRESRATGAGRKAKCEPSQFQCTNGRCITLLWKCDGDEDCAD
GSDEKNCVKKTCAESDFVCNNGQCVPNRWQCDGDPDCEDGSDENPEQCRNITCSPDEFTC
SSGRCISRNFVCNGQDDCSDGSDELDCAPPTCGEHEFQCSTSSCIPLSWVCDDDADCSDQ
SDESLEQCGRQPVMHTKCPASETQCGSGECIHKKWRCDGDPDCKDGSDEVNCPSRTCRPD
QFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDIGKVCNQE
QDCRDWSDEPLKECHVNECLVNNGGCSHICKDLVIGYECDCAAGFELIDKKICGDIDECQ
NPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPSLIFTNRRDIRKIGLERKEY
IQLVEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHVKMIDNVYNPAAIAVD
WVYKTIYWTDVASKTISVATLDGTRRKFLFNSDLREPASIAVDPLSGFVYWSDWGEPAKI
EKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVLKSL
EFLAHPLALTIFEDRVYWIDGENEAVYGANKFTGSELATLVNNLNDAQDIIVYHELVQPS
GKNWCEEDMQNGGCEYLCLPAPQINDHSPKYTCSCPNGYTLEANGRECHSTATTLTYSET
KDIHTTEIPPTSGLVPRGINVTTAVSEATVPPKGTSAAWAILPLLLLAMAAVGGYLMWRN
WQHKNMKSMNFDNPVYLKTTEEDLSIDIGRHSASVGHTYPAISVVSTDDDLA
Download sequence
Identical sequences XP_005615964.1.84170

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