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Domain assignment for XP_005903909.1.15283 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_005903909.1.15283
Domain Number 1 Region: 52-101
Classification Level Classification E-value
Superfamily Transcription factor IIA (TFIIA), beta-barrel domain 2.93e-19
Family Transcription factor IIA (TFIIA), beta-barrel domain 0.0000808
Further Details:      
 
Domain Number 2 Region: 3-53
Classification Level Classification E-value
Superfamily Transcription factor IIA (TFIIA), alpha-helical domain 8.78e-18
Family Transcription factor IIA (TFIIA), alpha-helical domain 0.0000821
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_005903909.1.15283
Sequence length 109
Comment PREDICTED: transcription initiation factor IIA subunit 2 [Bos mutus]; AA=GCF_000298355.1; RF=representative genome; TAX=72004; STAX=72004; NAME=Bos mutus; AL=Scaffold; RT=Major
Sequence
MAYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINAALAQRVRNRVNFRG
SLNTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGKNTGSNTTE
Download sequence
Identical sequences A0A024R5Z5 G3RVY6 H2Q9J2 L5K113 L8I2N0 P52657 Q32L01 W5QI34
ENSBTAP00000013602 9598.ENSPTRP00000012186 9606.ENSP00000379372 9913.ENSBTAP00000013602 ENSBTAP00000013602 ENSPTRP00000012186 ENSPTRP00000012186 gi|4758486|ref|NP_004483.1| ENSP00000379372 ENSP00000379373 ENSP00000379375 ENSP00000379372 ENSOARP00000022385 5iy6_O 5iy7_O 5iy8_O 5iy9_O 5iya_O 5iyb_O 5iyc_O 5iyd_O Hs4758486___KOG3463 ENSGGOP00000019967 NP_001032708.1.59421 NP_001032708.1.76553 NP_001307858.1.87134 NP_001307858.1.92137 NP_001307859.1.87134 NP_001307859.1.92137 NP_004483.1.87134 NP_004483.1.92137 XP_001173111.1.37143 XP_003827962.1.60992 XP_004010606.1.66739 XP_004056327.1.27298 XP_004056328.1.27298 XP_004056329.1.27298 XP_005685756.1.57651 XP_005685757.1.57651 XP_005903909.1.15283 XP_005955311.1.78601 XP_006072398.1.26621 XP_006072399.1.26621 XP_006920370.1.64745 XP_008951483.1.60992 XP_010835137.1.44457 XP_011361701.1.92234 XP_011361702.1.92234 XP_012025920.1.54773 XP_012025921.1.54773 XP_012036818.1.66739 XP_015451600.1.64745 XP_016064040.1.3490 XP_016064041.1.3490 XP_016783801.1.37143 XP_018866446.1.27298 XP_019824307.1.53367 ENSP00000379372 ENSP00000379373 ENSP00000379375 ENSGGOP00000019967

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