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Domain assignment for XP_005961629.1.78601 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_005961629.1.78601
Domain Number 1 Region: 28-279
Classification Level Classification E-value
Superfamily Calponin-homology domain, CH-domain 1.39e-92
Family Calponin-homology domain, CH-domain 0.00000306
Further Details:      
 
Domain Number 2 Region: 295-416
Classification Level Classification E-value
Superfamily Spectrin repeat 1.7e-33
Family Spectrin repeat 0.0000942
Further Details:      
 
Domain Number 3 Region: 1532-1687
Classification Level Classification E-value
Superfamily Spectrin repeat 1.51e-27
Family Spectrin repeat 0.0027
Further Details:      
 
Domain Number 4 Region: 1010-1164
Classification Level Classification E-value
Superfamily Spectrin repeat 6.55e-27
Family Spectrin repeat 0.00000577
Further Details:      
 
Domain Number 5 Region: 1850-2005
Classification Level Classification E-value
Superfamily Spectrin repeat 1.9e-26
Family Spectrin repeat 0.0019
Further Details:      
 
Domain Number 6 Region: 815-950
Classification Level Classification E-value
Superfamily Spectrin repeat 5.09e-25
Family Spectrin repeat 0.0037
Further Details:      
 
Domain Number 7 Region: 639-741
Classification Level Classification E-value
Superfamily Spectrin repeat 9.42e-24
Family Spectrin repeat 0.00026
Further Details:      
 
Domain Number 8 Region: 1229-1375
Classification Level Classification E-value
Superfamily Spectrin repeat 5.11e-23
Family Spectrin repeat 0.00073
Further Details:      
 
Domain Number 9 Region: 425-529
Classification Level Classification E-value
Superfamily Spectrin repeat 1.2e-22
Family Spectrin repeat 0.00031
Further Details:      
 
Domain Number 10 Region: 1690-1797
Classification Level Classification E-value
Superfamily Spectrin repeat 3.12e-22
Family Spectrin repeat 0.0024
Further Details:      
 
Domain Number 11 Region: 745-849
Classification Level Classification E-value
Superfamily Spectrin repeat 4.46e-20
Family Spectrin repeat 0.0016
Further Details:      
 
Domain Number 12 Region: 528-636
Classification Level Classification E-value
Superfamily Spectrin repeat 7.72e-18
Family Spectrin repeat 0.00081
Further Details:      
 
Domain Number 13 Region: 2011-2070
Classification Level Classification E-value
Superfamily Spectrin repeat 0.000000000000489
Family Spectrin repeat 0.0014
Further Details:      
 
Domain Number 14 Region: 1389-1482
Classification Level Classification E-value
Superfamily Spectrin repeat 0.000000000236
Family Spectrin repeat 0.0017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_005961629.1.78601
Sequence length 2138
Comment PREDICTED: spectrin beta chain, erythrocytic [Pantholops hodgsonii]; AA=GCF_000400835.1; RF=representative genome; TAX=59538; STAX=59538; NAME=Pantholops hodgsonii; AL=Scaffold; RT=Major
Sequence
MTSATEFENVGNQPPYSRINARWDGPDDELDNDNSSARLFERSRIKALADEREVVQKKTF
TKWANSHLARVSCRITDLYKDLRDGRMLIKLLEVLSGEMLPKPTKGKMRIHCLENVDKAL
QFLREQRVHLENMGSHDIVDGNHRLVLGLIWTIILRFQIQDIVVQTQEGRETRSAKDALL
LWCQMKTAGYPHVNVTNFTSSWKDGLAFNALIHKHRPDLIDFDKLKDSNARHNLEHAFEV
AERQLGIIPLLDPEDVFTENPDEKSIITYVVAFYHYFSKMKVLAVEGKRVGKVIDHAIET
EKMIEKYSGLASDLLTWIEQTITVLNSRQFANSLAGVQQQLQAFSTYRTIEKPPKFQEKG
NLEVLLFTIQSRMRANNQKVYTPHDGKLVSDINRAWESLEEAEYRRELALRDELIRQEKL
EQLARRFDRKAAMRETWLNENQRLVAQDNFGYDLAAVEAAKKKHEAIETDTAAYEERVRA
LEDLAQELERENYHDQKRITARKDNILRLWDYLQELLRARRQRLEKTLDLQKLFQDMLHS
IDWMDGIKAHLLSAEFGKHLLEVEDLLQKHKLMEADIAIQGDKVKAITTATLQFTEGPGY
QPCDPQVIRDRVSHLEQCFEELSNTAAGRKAQLEQSKRLCKFFWEMDEAESWIKEKEQIY
SSLDYGKDLTSVLILQRKHKAFEDELRGLDAHLGQIFREAEGMVARKQFGHERIEVRIKK
VSDQWNELKDLAAFCKKNLQDTENFFQFQGDADDLKAWLQDAHRLLSGEDVGQDEGATRA
LGKKHKDFLEELEESRGVMEHLEQQAQDFPQGFQDSPDVTNRLQALRDLYQQVVAQADMR
RQRLQDALDLYTVFGETDACELWMGEKGKWLAQMEIPDTLEDLEVVQHRFDILDQEMKTL
MTQIDGVNLAANSLVESNHPRSAEVKKCQDHLNTRWQDFQTMVSERREAVDSALRVHNYC
VDCEETGKWIMDKTKVVESTKDLGRDLAGVIAIQRKLSGLERDVAAIQTRLGTLERESQR
LMASHPEQKKDIEQRQAYVEELWQGLKQALKSQEASLGEASQLQAFLQDLDAFQAWLSTT
QKDVASKDMPESLPEAEQLLQQHAAIKDDIDRHQESYQKVRMSGEKVTHGQTDPEYLLLA
QRLDGLEKGWDALSRMWESRSQALTQCLGFQEFQKDAKQAEAILSNQEYTLAHLEPPDSL
EAAEAGIRKFEDFLVSMENNRDKVLSPVDSGNKLVAEGNLFSDKIKEKVQLIEDRHRKNN
EKALEASELLKDNLELQNFLQNCQELTLWINDKLLTSQDVSYDEARNLHNKWLKHQAFVA
ELASHQGWLENIDAEGKQLIEEKPQFAALVSQKLEALHQLWDELQANTQETARQLSAARS
SDMRSQTQADLNKWIRAMEDQLQSDDLGKDLTSVNRMLAKLKRVEDQVNVRKEELEELFA
QMPSLGEEVGDEDLSIEKRFLDLLEPLGRRKKQLESSRAKLQISRDLEDETLWVEERLPL
AQSADYGTNLQTVQLFMKKNQTLQNEILGHTPRVEDVLHRGQQLVAAAEIDCQDVEERLR
QLQGSWDTLREAAASRLKHLQEASEAQQYYLDAGEAEAWIGEQEFYVFSDENPQDEESAI
VMLKRHLRQQRAVEEYGRNIKQLAGRAQGLLSAGHPEGEQIIRLQGQVDKQYAGLKDMAE
ERRRKLENMYHLFQLKREVDDLEQWIAEKDTVASSSEMGQDFDHVTVLRDKFRDFARETG
AIGQERVDNVNAVIERLIDAGHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLQ
RYFYTGSEILGLIGEKHRELPEDVGLDASTAESFHRTHTAFERELHLLGEQVQQFQDVAA
RLQTAYAGEKADIIQNNEQEVSAAWQALLDACAGRRTQLVDTADKFRFFSMARDLLSWME
SIVRQIETQEKPRDVSSVELLMKYHQGIRAEIETRSKNFSTCLELGESLLQRQHQASDEI
REKREQVVSRREEMKEKWEARWERLRMLLEVCQFFRDASVAEAWLIAQEPYLASRDYGHT
VDGVEKLLKRHEAFEKSAASWEERFAALEKPTTLELKERQTPERTEEEPGLQEEEGETAG
EAPRGPHRATTERTSPVSSLSQLSSSWDSLLPETHRPD
Download sequence
Identical sequences XP_005961629.1.78601

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