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Domain assignment for XP_005978534.1.78601 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_005978534.1.78601
Domain Number 1 Region: 245-485
Classification Level Classification E-value
Superfamily Calponin-homology domain, CH-domain 1.18e-73
Family Calponin-homology domain, CH-domain 0.0000178
Further Details:      
 
Domain Number 2 Region: 1466-1618
Classification Level Classification E-value
Superfamily Spectrin repeat 4.19e-29
Family Spectrin repeat 0.0005
Further Details:      
 
Domain Number 3 Region: 506-626
Classification Level Classification E-value
Superfamily Spectrin repeat 2.09e-28
Family Spectrin repeat 0.00035
Further Details:      
 
Domain Number 4 Region: 3050-3197
Classification Level Classification E-value
Superfamily Spectrin repeat 2.61e-26
Family Spectrin repeat 0.00027
Further Details:      
 
Domain Number 5 Region: 2725-2880
Classification Level Classification E-value
Superfamily Spectrin repeat 1.24e-24
Family Spectrin repeat 0.0018
Further Details:      
 
Domain Number 6 Region: 1774-1907
Classification Level Classification E-value
Superfamily Spectrin repeat 2.23e-24
Family Spectrin repeat 0.0015
Further Details:      
 
Domain Number 7 Region: 2316-2453
Classification Level Classification E-value
Superfamily Spectrin repeat 9.36e-23
Family Spectrin repeat 0.00086
Further Details:      
 
Domain Number 8 Region: 799-940
Classification Level Classification E-value
Superfamily Spectrin repeat 6.84e-22
Family Spectrin repeat 0.0017
Further Details:      
 
Domain Number 9 Region: 1895-2033
Classification Level Classification E-value
Superfamily Spectrin repeat 1.7e-21
Family Spectrin repeat 0.0018
Further Details:      
 
Domain Number 10 Region: 3153-3304
Classification Level Classification E-value
Superfamily Spectrin repeat 6.15e-21
Family Spectrin repeat 0.0048
Further Details:      
 
Domain Number 11 Region: 3470-3624
Classification Level Classification E-value
Superfamily Spectrin repeat 6.55e-21
Family Spectrin repeat 0.003
Further Details:      
 
Domain Number 12 Region: 2513-2667
Classification Level Classification E-value
Superfamily Spectrin repeat 2.13e-20
Family Spectrin repeat 0.0017
Further Details:      
 
Domain Number 13 Region: 3256-3410
Classification Level Classification E-value
Superfamily Spectrin repeat 3.24e-20
Family Spectrin repeat 0.0016
Further Details:      
 
Domain Number 14 Region: 2856-2984
Classification Level Classification E-value
Superfamily Spectrin repeat 7.68e-20
Family Spectrin repeat 0.00036
Further Details:      
 
Domain Number 15 Region: 1067-1201
Classification Level Classification E-value
Superfamily Spectrin repeat 2.7e-19
Family Spectrin repeat 0.0033
Further Details:      
 
Domain Number 16 Region: 1257-1407
Classification Level Classification E-value
Superfamily Spectrin repeat 2.06e-17
Family Spectrin repeat 0.0018
Further Details:      
 
Domain Number 17 Region: 903-1016
Classification Level Classification E-value
Superfamily Spectrin repeat 3.01e-16
Family Spectrin repeat 0.0031
Further Details:      
 
Domain Number 18 Region: 2091-2246
Classification Level Classification E-value
Superfamily Spectrin repeat 4.68e-16
Family Spectrin repeat 0.0027
Further Details:      
 
Domain Number 19 Region: 622-735
Classification Level Classification E-value
Superfamily Spectrin repeat 0.0000000000000301
Family Spectrin repeat 0.0009
Further Details:      
 
Domain Number 20 Region: 2252-2346
Classification Level Classification E-value
Superfamily Spectrin repeat 0.0000000000209
Family Spectrin repeat 0.0018
Further Details:      
 
Domain Number 21 Region: 3625-3691
Classification Level Classification E-value
Superfamily Spectrin repeat 0.00000000202
Family Spectrin repeat 0.0032
Further Details:      
 
Domain Number 22 Region: 1624-1720
Classification Level Classification E-value
Superfamily Spectrin repeat 0.000000273
Family Spectrin repeat 0.0029
Further Details:      
 
Domain Number 23 Region: 710-800
Classification Level Classification E-value
Superfamily Spectrin repeat 0.00000101
Family Spectrin repeat 0.0037
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_005978534.1.78601
Sequence length 3960
Comment PREDICTED: LOW QUALITY PROTEIN: spectrin beta chain, non-erythrocytic 5 [Pantholops hodgsonii]; AA=GCF_000400835.1; RF=representative genome; TAX=59538; STAX=59538; NAME=Pantholops hodgsonii; AL=Scaffold; RT=Major
Sequence
MKEETLEHLSGAFLSHPLWARATPCGRWEDNAGCVPSPLPRWPKRRTVALPQPQPQLQPL
LMSLPPHPAPAICHLRPSSRVSSQGLDINKVSNFFFPSTCPIHPEQQQPNAVAQGKPLAA
GALKEESGKAGGPLKFRSPTRSPRPYLARSQAVPTHHTWGNLARRGSPVPGSHQNPPSSP
SFQARSVSSLRKYPVAPHPQRAPGLLASEPHNPQQFLGATGHLKRESSRRPRAGSPGPAX
AMDSAYEMGHIRKLQVRHMQVQEKTFTKWINSIFQRGRVGVEIHNLCTELADGTHLLRLL
ELISGEALPPPNRGRMRVHFLENSSRALAFLRAKVPIPLIGPENIVDGDQTLILGLIWVI
ILRFQISHICLDREEFGVSAALLSAKEALLVWCQRKTAGYANINITDFSRSWSDGLGFSA
LIHAHRPDLLDYSSLHPDHPLHNLRCAFHVAEQELGIAQLLDPEDVAALQPDERSIMTYV
SLYYHHFSRLHQEQTVQRRLAKILLQLWESEALQTQYEELVADLLCWIAEKQVQLEARDF
PDNLPAMRQLLVAFASFRTQEKPPRLQQRGATEALLFRLQTVLRAQNRRPFLPPEGLGPA
ELSRCWTSLEQAEASRSRALQQRLLQLERLETLARRFHRKAALRESFLTDTEQVLARAAA
PPASPAMVEAAAQRLGMLEASILPQEGRFQALAEIADILQQERYHGGTEVASRQLEITQR
WERLLQRLQGQRKQIAGMQAVLSLLQEVETASDQLNELQVLVSSVACGQKLTEVERLLQR
HDLLEAQISALGAHVSHLAHQTMKLDSSTGTAVEVLQAKARALAQLSQSLTSLARSRRAS
LEQTLQQAELLHSCEEEEAWLREHEQLVEDASPGPDLSQIAAALQKHKALRAELHRHQAV
CADLMQRGRKLGACGPPTQPDPWERAEAVQGMWQRLWARMDEQGVRLQAALFVQQYFTDV
AEADSWLQEQRSALESASCGQDQVTTEALLRQHLRLERSVRTFGTELRRLDEQAQVATAQ
AALLVVSALSSLKIGPRNLGAWREVFCHSGPWGTQKMALPDEPDPGFDPNTILQTQDRLS
QDYEGLQAQAERRRAQLEEAVALFGFYGSCGELQSWLTKQTTLLQTLQPEANNLEVMQLK
HENFLTALAVGRGLWTEVDSSAEQLKQRCPRESPQIQLRQEELSQRWEQLEALKKEKEAQ
LVCTTHVCSFLQTCGSTRVQLQNLILQLETLELGNSEDGHRVLRVGQQKMLVLEKDIRHL
QRAASKVEEMGPAESPSLQGHVETLQGLLERVREQVAQRAQAWAHRSFLQESQRLLLWAD
SIQAKLHSKEEAVDVASAQQLLGKHRELLEEIHLQQERLQQLETQGQPMAASGSPDFPEV
ASALRLLGHQGQELKAAWEQRQQQLQEGLELQKFGRDVDGFTASCASHEAFLRLDSLQEG
MVEAQSLVQQLQECGRLLDALGSRAEGLQACGEKLARSRHPAAHKVREQLQSIQEQWTRV
QERSEQRGRQLLASLQLQEWKQDVVEVMLWMEEKGRMLVDEPSREPSNVWRKLRRHEAAT
RELAATQGHVEGLQQAGRELLSSRPRAQEDVQARLQGLSSKWEELRRKVAERGKQLQQAR
QQDQLLRLLQEAKEKMEQLEGTVQRAEMGQDLGSSRGLQKQHYQLEAESQALVSKMAALV
PEARQAVSSQAIMEETQKYLQRFKALQQHLASRRRQLQASVELYHFHHLSGAELVWVAEH
MPTPSTSSAKYPDGAPRLLHKHEELWVEVRAHQGQVQWVLGSGRHLAASGHPQAQHIMER
CQELEGRWADLEQACEAQARHLQQAAALQECFLDASELEDWVEEKWPLVSSQDYGGDETA
TIRLIKKHQALQQELAHYWSSMEELDWRAKTLTGPEAPAQLGVVQKRLRERLQALQELAA
TRDRELEGTLKLHEFMREAEDLQSWLASQKQVAGGGESLGEDYEDILHLCTKFVRFQHTV
EMGGQRVASCQQLAEKLLKRGHRAAPRAHQMQQDLQAAWAELWELTQARGRLLRDAEATL
KVHRDMLEALTQVQEKTTSLPCDVAQDLRGLEVQLRRQEGLERELMGTDQQLQELLEMGG
MVQRLGPGPQAHAVQQRQQALVQAWETLKLRAEQRRAQLERAWLLARFHMAVRDYTSWVA
SVWQELQVEASSQEPGSGPLKLSAHQQLRAVLEAQEELYQQAAQLGQQALLAAGTCIKEV
QDGLQALRDQRERVFQAWEQKQERLQVMGREQLFLRKCGHLDEILKAREVLLKTSALGSS
VEEVEQLIRKHETFQKVLAAQEEKEAALCEQVKRLGGPRAQDLLCTVLERRARVKELVES
RQHALHTSLLVATFIRAATQAEDWIQEQLQQLKEPVPSGDLKAKLRHLQKHQAFEAEVQA
REEIITSVVKEGEAVLAQSHPLVGEVSQRLRELQEHWEKLRQAVALRGEDLEDKRNILEF
LQRVDAAEAWIQEMEVMVNVSDLGQDLEHCQQLHRQLCKLRGVWAGGTVDDARIRSVSDF
SPQLKTQDAEQLKTIWQRQQQLNNRWNSFHGNLLRYQQQLEVALEIHTLSQKLDDITEQV
RKKAALVQALDCGKDLDSVQRLKQKHKELEQEIGLLQAQVEPLEHEAGQVCQRSPEMAHG
LSHQQQEMMDSWRQLQSRIQKWKESLDVLHQAQELQAVLRELLVWAQRLRAQLDSRRSPS
SLAEVQCMLEEHQELKAELDSRMDSISLAQSTGQRLLAVEHPSTPNIRQALADFNQELNI
LEGAWHEHQLHLHQALELQRVLSSVEQMESWLCSLEACPASEGLGDSLANVETLLWKHRV
REQDLEAQAEKMSVLEAATRSLLQGGHPEAQVPLSRCQAMLLRKEALLERARTRCRQLEE
LRQLQSFLQDSCEMAAWLREKNLVALEEGWWDPVDLQAQLRQQQNLQAELDTRAHHQQRL
QMEGQRLLQDGHSASETIQERLQELRKLWEELQAQCQRRSAKLQEAQEALRLRRSMEELE
SWLEPVELKLRVPIGGQDQPGLDELLGAQGELEAAVDRQAGRAQALLGQAQAQAYVQEGH
CLARDVEEQAQRLLQRFESLRAPLQERRTALEARSLLLQFFRDADEEMAWVREKLLLVAA
QDCDQSLSALRRLLEKHQSLESEMSSHEALTQAVVGTGRKLVQAGHFAACDVAARVQQLE
DATGRLRAEAAQRRRRLQQAQEAQYFLTELLEAESWLEERGCGLDIEDMGQSAEATQTFL
RQLEATRRDLEGFTTRIERLQQIAALLESGQNPESPKVLAQMHAVRDAHSGLLRRAEGRG
QGLKEQLQLHQLEREALLLDAWLASKVAIAESQDYGQDLEAVKLLEEKFDAFRKDVQSLG
QARVQALRERAGSLERAAPRCSPQIQAQRSLIEASWERLDEAVKARTQNLAATREVRGLE
QVAAELQGRMQKKATLVARNAFSLSLSSVQTLQQQHRCLERELAAMEKEVAWVQTEACRL
GQLHPAAQEGLAKQLAGVQEAWDTLNAKVHEQNRQLEKAAEGHAFLGRCRELLAWAMEKQ
ALVSSEELAGDIARAEGLLALLEELGREIKEYCLQAQNVQQEGQRLVDSGHCMSLEVTGC
LQDLDRQLRALREAWALRREHCEESWRLQKLRQELDQAEAWLACWEGLLLDPNCGHSVSD
VELLLCRHKGLEKLLASQEEKFARLQQEAEVEQKQEVKGLKPLRSWWPRAPLTETGDPQP
SVPIGSCIRFTTVSLECTAETLGDAKGAPTTEGILELKQHLLPGRRQNTASTASIDLAGA
QREKPGDHHDGKHTFSLRLATGETLSAAPSAGQTGSWRGALSSWTAPSLTPELQARPSGF
LTERNAERVPGMPAPLRFHSGPPPAWLQETRGYTYSFPGPVQLPQTAGPAEQTAEGSRRL
SCSGQIHSLGLKTNAEVAPNLRATSEDTLLSGPSGPTSGIAGSSSRDGPHQGQSLLRSHP
Download sequence
Identical sequences XP_005978534.1.78601

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