SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_006225055.1.4139 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_006225055.1.4139
Domain Number 1 Region: 935-1156
Classification Level Classification E-value
Superfamily DBL homology domain (DH-domain) 9.16e-35
Family DBL homology domain (DH-domain) 0.0019
Further Details:      
 
Domain Number 2 Region: 1317-1518
Classification Level Classification E-value
Superfamily PH domain-like 1.81e-31
Family Pleckstrin-homology domain (PH domain) 0.00011
Further Details:      
 
Domain Number 3 Region: 1147-1264
Classification Level Classification E-value
Superfamily PH domain-like 3.08e-24
Family Pleckstrin-homology domain (PH domain) 0.0052
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_006225055.1.4139
Sequence length 1520
Comment PREDICTED: FYVE, RhoGEF and PH domain-containing protein 5 isoform X1 [Rattus norvegicus]; AA=GCF_000002265.2; RF=na; TAX=10116; STAX=10116; NAME=Rattus norvegicus; strain=BN; Sprague-Dawley; AL=Chromosome; RT=Major
Sequence
MHRADSPKPPVAPKPKVTTNPSTPPAKFPASQRPNSFPSPNSMSRGPKPPIAPKPRLAGP
SEYGAGVYLNNSLSKCSNGRLLCEDPSLYDGHHSTLNCLELETDEQYIMVPRAPQRDDAL
TDRATEKQGFEGEAQEHGTEQTGTERDLAAPDEEAPSRDSEEGVDHALEDEEDCDHDLET
DGTPTAPGEGAPSRDGEKGEEDCGQDPGVEEHPMSEEEGEEEEAKECVHNRDDRAPWDGG
EPFLNEVVLTHVCSQSPEVPCWEPGLPETPGEVDEDSEDICNNTELGKPNQDTGQDTEDA
SMGSPESEVSPDVQEQEAATDSPEVFEEDSVDAAEGEDQIARDEPPNCEEDTNNRETAAA
TMQAGEDHGEDGDRVQEDPAEENCQIIPFESDSVEEDCSPTLTENPYELFPTESTSFCNN
SGSLAESDKGQESVCKICVEEVPGIGPSLSQGDSLQDGSGEEAPVPEVVVVPENEDPMDD
ALSSPYVMGVGLLSLGEGAQSDTQAASGTLSGYSTWEEGDSDGGQVPVDRKNIATRARPH
SGKVAGHVPETVLEETGPEACSSAMGIRDTGDEVRKIGILPEGKPSESLRALPAKPRAFT
LYPRSFSVEGRESPLSMFREPEGAGLDMHRVRRKEDNLSLPGAIGSSGSFSQRSHLPSSG
TSTPSSVVDIPPPFDLACITKRPITKSSPSLLIDGDTLEKASKKKKSSFKRFLELTFRKK
TESKVHVDMSLSSSRSSSESSYHGPARVLELDRRSLSNSPQLKCHTGKLRASDSPASLIF
YRDSKRKGVPFSRTVSRVESFEDRSRPPFLPLPLTKPRSISFPNADTSDYENIPAMNSDY
ENIQIPPRRPARTGTFTKLFEEQSRALSTANENDGYVDMSSFNAFESKQQSSEQEAESAY
TEPYKVCPISTTPKEDLTSDEEQGSSEEEDNASRDPSLSHKGEGQSRAFVIAQELLSSEK
AYVQMLQHLSLDFHGAVLRALENVEQEGREPLAQEELRQGLRELPAICDLHQGILESLEQ
RLGDCGEGQQQVADIFLAREQEFEHHAAHILQFDRYLGLLAESCLLSPRLATTVREFEQQ
SSQGGGQSMKHRMLRVVQRLFQYQVLLTDYLNNLCPDSAEYDNTQSALNLISKVTDRANE
SMEQGENLQKLVHIEYSVRGQGDLLQPGREFLKEGTLMRVRGKSRHPRHLFLMNDTLLYT
HPQKDGKYRLKSSLPVANMKVSRPVMDKVPYALKIETPESCLTLSASSCAERDEWHYCLS
RALPEDYKTQALAAFHHSVEIRERLGISLGERLPTLVPVTHAMMCMNCGCDFSLTVRRHH
CHACGKIVCRNCSRNKYPLKCLKNRMAKVCDGCFRELKLRNGPVPGPIRERPVSMSFPLS
SSRFSSGSTFSSVFQSISPSTFKKQKKVPSALAEVAASGEGSAISGYLSRCKSGKRRWKK
LWLVIKGKVLYTYLASEDKVAMESIPLLGFTIAPEKEEGSSEVGPVFHLYHKKTLFYSFK
AEDSSSAQRWMEAMEDASVL
Download sequence
Identical sequences XP_006225055.1.4139 XP_006236987.1.100692

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]