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Domain assignment for XP_006242504.1.100692 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_006242504.1.100692
Domain Number 1 Region: 37-492
Classification Level Classification E-value
Superfamily PLP-dependent transferases 3.81e-127
Family Pyridoxal-dependent decarboxylase 0.00029
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_006242504.1.100692
Sequence length 493
Comment PREDICTED: cysteine sulfinic acid decarboxylase isoform X1 [Rattus norvegicus]; AA=GCF_000001895.5; RF=representative genome; TAX=10116; STAX=10116; NAME=Rattus norvegicus; strain=mixed; AL=Chromosome; RT=Major
Sequence
MADSKPLRTLDGDPVAVEALLRDVFGIVVDEAIRKGTNASEKVCEWKEPEELKQLLDLEL
QSQGESRERILERCRAVIHYSVKTGHPRFFNQLFSGLDPHALAGRIITESLNTSQYTYEI
APVFVLMEEEVLKKLRALVGWNTGDGVFCPGGSISNMYAINLARFQRYPDCKQRGLRALP
PLALFTSKECHYSITKGAAFLGLGTDSVRVVKADERGKMIPEDLERQISLAEAEGSVPFL
VSATSGTTVLGAFDPLDAIADVCQRHGLWLHVDAAWGGSVLLSRTHRHLLDGIQRADSVA
WNPHKLLAAGLQCSALLLRDTSNLLKRCHGSQASYLFQQDKFYNVALDTGDKVVQCGRRV
DCLKLWLMWKAQGGQGLEWRIDQAFALTRYLVEEIKKREGFELVMEPEFVNVCFWFVPPS
LRGKKESPDYSQRLSQVAPVLKERMVKKGTMMIGYQPHGTRANFFRMVVANPILVQADID
FLLGELERLGQDL
Download sequence
Identical sequences Q64611
10116.ENSRNOP00000016205 ENSRNOP00000016205 NP_068518.1.100692 NP_068518.1.4139 XP_006242500.1.100692 XP_006242501.1.100692 XP_006242502.1.100692 XP_006242504.1.100692 XP_008764004.1.100692 XP_017450565.1.100692 ENSRNOP00000016205

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