SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for XP_006375397.1.11743 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_006375397.1.11743
Domain Number 1 Region: 106-214
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 5.89e-30
Family B3 DNA binding domain 0.0000123
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_006375397.1.11743
Sequence length 405
Comment hypothetical protein POPTR_0014s10290g [Populus trichocarpa]; AA=GCF_000002775.3; RF=representative genome; TAX=3694; STAX=3694; NAME=Populus trichocarpa; AL=Chromosome; RT=Major
Sequence
MNFVGGERGYFDKEEQEEEEAMSSKLPFASPCTSSSSSKYKNFLPEHQNLWPRLFDQPRQ
DSETQEPSLNFVKKLEFMELSLGNNNESESSSTDAGGGASESIEREHMFDKVVTPSDVGK
LNRLVIPKQHAERYFPLDSSSNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRF
VKEKRLYAGDIVSFQRGVGETGKHRLFIDWRRRPNAPDPTSFSHLELQNQLHYPQSLRWG
RLYSMPQSNLPMQQPQLQHLNYSIHPYQQHQHHNHQYHYHQPSNISYGNAAQYYLRPPAS
TLPIGAVHEQGGSHVPVVIDSVPVVHGKTVGKRLRLFGVNMECPTQNDPSSSVTMIRHGT
LDSLSPRLASSSLPPPFQVREPTGAPMQAEFSKKGKASLSFDLDL
Download sequence
Identical sequences U5FSN5
POPTR_0014s10290.1|PACid:18222541 XP_006375397.1.11743

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