SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_006592033.1.40590 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_006592033.1.40590
Domain Number 1 Region: 612-850
Classification Level Classification E-value
Superfamily Tropomyosin 0.000000000049
Family Tropomyosin 0.0011
Further Details:      
 
Domain Number 2 Region: 433-622
Classification Level Classification E-value
Superfamily Tropomyosin 0.000000239
Family Tropomyosin 0.00069
Further Details:      
 
Weak hits

Sequence:  XP_006592033.1.40590
Domain Number - Region: 222-420
Classification Level Classification E-value
Superfamily Tropomyosin 0.000641
Family Tropomyosin 0.00098
Further Details:      
 
Domain Number - Region: 44-265
Classification Level Classification E-value
Superfamily Tropomyosin 0.00222
Family Tropomyosin 0.0012
Further Details:      
 
Domain Number - Region: 848-1076
Classification Level Classification E-value
Superfamily Tropomyosin 0.00752
Family Tropomyosin 0.0022
Further Details:      
 
Domain Number - Region: 1146-1216
Classification Level Classification E-value
Superfamily Intermediate filament protein, coiled coil region 0.0115
Family Intermediate filament protein, coiled coil region 0.0086
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_006592033.1.40590
Sequence length 1357
Comment PREDICTED: myosin-4-like [Glycine max]; AA=GCF_000004515.4; RF=representative genome; TAX=3847; STAX=3847; NAME=Glycine max; cultivar=Williams 82; AL=Chromosome; RT=Major
Sequence
MEEEKKVISEVSVTKVVEEADHKNESIKETNGDLPSEVKKEEEENAFDGEFIKVEKEENS
IDDKSHKTERSSDSPSREFLEAQEKIQELEVELQRLTESLKTSEHENDQLKGEISVTKEK
LEESGKKYEELDLSHKKLQEQILEAENKYNQQLSTLEEALQSQEVKQKELFQVKEAFDGM
NLELENSRKRMQELQDELQLSADEAQKFEELHKQSGSHAESEGKKALEFERLLEEAKLTA
KGVEDEMASLKEELKGVYDKIAENQKVEEALKTTTAELSTIQEELTLSKSQLLEVEERLS
SRDSLVDELTNELNLIKTSETQVKEDMLALQNLLASTKEELEEKISELETARSKLQEEEK
LRESIEAALKSQEAQFLTVQEELTKFKTEKETLEATMEDLTRSSKKFEELCADLEEKLKL
SGENFLRTDSLLSQALSNNAELEQKVKSLEDLHNESGAAAATATQRSLELEGHIQTSTAA
AEEAKSQLRELETRFIAAEQRNVELEQQLNLVQLKTSDAEREVAELSEQISNLNAKLEEA
KEEKSLLNSQLQEYTEKVALLESDLNQSSLRSSQLEEELKNVNEKCAEHEDRASMNHERS
RELEDLIQSSHSKLEDSDKKVSELELLLEAEKYRIQELEQQISTLEEKRGASEGQANKYL
DDVSNLTSELEAIQARASTLETTLQAANERGKELEDSLNAVTEEKKNLEDASISLNEKLA
EKENLLEILRDDLNLTQDKLQSTESDLREAELRESEIIEKLKASEENLVVRGRDIEETAA
RHSELQLLHESLTRDSEQKFQEAIEKFNNKDSEVQSLLEKIKILEEQIAKAGEQSTSVKN
EFEESLSKLASLESENEDLKRKILEAESKSSQSFSENELLVGTNIQLKTKIDELEESLNH
ALSEKEAAAQELVSHKNSITELNDLQSKSSEIQCANEALILKVESQLQEALQRHTEKESE
TKELNEKLNTLEGQIKLFEEHAREAVATSGTHKAELEQSLIKLKHLEIVIEELQNKSLHH
EKETAGLNEENSKLNQEIASYESKLSDLQEKLSAALVEKEETDKELLTLKDAMEKLGTKH
SAEVQTLNSQISSLVDEKNLLNDTNQDLKKELQSLIFDLEEKLKEQQKIEGSLRSEVETL
KIEIAEKSALRSQLQEIEGKLTKAESRLNEEVGSVQAAASQREAELSSKLEDYAQKFNDR
NVLNDKVAALEKELQLARDGNVNQEGAESQKLELEAALKNSLEELETKKNDISLLQKQVT
DLEQKLRVAGDKSSVKGDESVDQKEGLEVKSRDIGSSLSIPSKRKSKKKSEVTSGQTSSS
SETHVQTGHDSPVINFKFILGVALVSIVFGIILGKRY
Download sequence
Identical sequences K7LSM2
XP_006592033.1.40590 XP_006592034.1.40590

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]