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Domain assignment for XP_006892983.1.29581 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_006892983.1.29581
Domain Number 1 Region: 348-401
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000558
Family Laminin-type module 0.037
Further Details:      
 
Domain Number 2 Region: 779-821
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000014
Family Laminin-type module 0.0067
Further Details:      
 
Domain Number 3 Region: 982-1031
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000153
Family Laminin-type module 0.0055
Further Details:      
 
Domain Number 4 Region: 934-984
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000179
Family Laminin-type module 0.05
Further Details:      
 
Domain Number 5 Region: 873-925
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000698
Family Laminin-type module 0.0077
Further Details:      
 
Domain Number 6 Region: 523-562
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000019
Family Laminin-type module 0.01
Further Details:      
 
Domain Number 7 Region: 471-515
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000586
Family Laminin-type module 0.0091
Further Details:      
 
Domain Number 8 Region: 284-337
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000023
Family Laminin-type module 0.026
Further Details:      
 
Domain Number 9 Region: 827-875
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000391
Family Laminin-type module 0.023
Further Details:      
 
Domain Number 10 Region: 1139-1187
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000184
Family Laminin-type module 0.014
Further Details:      
 
Domain Number 11 Region: 436-473
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000279
Family Laminin-type module 0.027
Further Details:      
 
Domain Number 12 Region: 1034-1088
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000419
Family Laminin-type module 0.0022
Further Details:      
 
Domain Number 13 Region: 1091-1133
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000614
Family Laminin-type module 0.019
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_006892983.1.29581
Sequence length 1794
Comment PREDICTED: laminin subunit beta-2-like [Elephantulus edwardii]; AA=GCF_000299155.1; RF=representative genome; TAX=28737; STAX=28737; NAME=Elephantulus edwardii; AL=Scaffold; RT=Major
Sequence
MERASGVRRRGPCGSPLPWALQLGLLMSGLVCALAQAPDMPSCSRGSCYPATGDLLVGRA
DRLTASSTCGLRSPQPYCIVSHLQDEKKCFLCDSRRPFSARDNPNSHRIQNVVTSFAPQR
RTAWWQSENGVPMVTIQLDLEAEFHFTHLIMTFKTFRPAAMLVERSADFGRTWHVYRYFS
YDCGADFPGVPLAPPRHWDDVVCESRYSEIEPSTEGEVIYRVLDPAIPIPDPYSPRIQNL
LKITNLRVNLTRLHTLGDNLLDPRREIREKYYYALYELVVRGNCFCYGHASQCAPAPGAP
AHAEGMVHGACVCKHNTRGLNCEQCQDFYHDLPWRPAEDGHSHACKKCECHGHSHSCHFD
MAMYLASGNVSGGVCDACQHNTVGHHCELCRPFFYRDPTKDLRDPAVCRSCDCDPMGTQD
GGRCDSHDDPALGLVAGQCRCKEHVVGTRCQQCRDGFFGLSASDPRGCRRCQCDGRGTVS
GSTPCDPSSGTCFCKRLVTGRGCDRCLPGHWGLSHDLLGCRPCDCDVGGALDPQCDATTG
QCRCRQHMVGRRCEQVQPGYFRPFLDHLTWEAEDSRGQALEVVERMVTTGSTPSWTGRGF
VRLRESQVLEFLVTSVPRAMDYDLLVRLEPQVPEQWTEMVLTVQRPGPVSAHSPCGHVLP
EDDRIRGTLRPGTRSIVLPSPICLEPGISYTLRLELVQGRGGAHSGPGLLIDSLVLLPRV
LVLEMFSGGDAAALERRATFEHYRCHEEGLAPSKTPPSETCAPLLISASVLLYNGALPCQ
CDPQGSLSSECNPHGGQCLCKPGVAGRRCDRCAPGYYGFGPMGCRACQCSPEGALSGLCE
GASGQCPCRTGAFGLRCDHCRRGQWGFPACRPCVCNGRADDCDPHTGACLGCRDHTGGEH
CERCIAGFYGDPRLPHGGQCRPCPCPEGPGSRRHFATSCHRDGYSQQVVCRCQAGYTGLR
CDACAPGHFGDPSRPGGQCQPCECSGNIDPVDPDACDPRTGQCLRCLHNTEGPQCAHCKP
GFHGQAPRQSCHRCTCNQLGTDPQQCPSTSWCHCDPSSGQCPCLPNVQGLSCDRCAPNFW
NLTSGRGCQPCACHPSRATGPTCNEFTGQCHCRAGFGGRTCSECQELHWGDPALQCRACD
CNPHGIDSPQCHRSTGHCSCRPGVSGVRCDQCARGFSGVFPACHPCHACFGDWDRVVQDL
ATRTRHLAQRVQELQQTGVLGAFESNFLSIQEKLDTVQGIVSARNTSAVSTAQLVEATEE
LRHEIGEATEHLTQLEAKLTDVQDGNFNANHALSGLERDGLALNLTLRQLGQHLDLLKHS
NFLGAYDSIRHAHRQSTEAERRANTSTLAVPSLVSDSAATRHRTTVLMDGQKANFNHIHA
ANQQALANLTARTNTLSLTGINELVCGAPGDAPCSTSPCGGAGCRDEDGQPRCGGLNCNG
AAAVADLALGRARHTQAELQRALSESGGILSQVAETRRRAGEAQQRAQVVRDKANATRGQ
VEQANQELRELIQSVKDFLSQEGADPDSIEMVATRVLELSIPASPEQIQNLAAEIAERVR
SLADVDTILAHTVGDVRRAEQLLQDARRARTRAEVEKQKAETVQAALDEARRAQSAAQGA
IRGATVDTRDTEETLRQVQERIAGTEQALGSAGDRVRQLDTFLEALKLKRAGNSLAASQA
EETAGSAQTRAQEAEQLLQGPLGDQYQRVKSLAELKAQGVLGAQARAEQLRDEARSLLQA
AQDKLQRLQELEGTYEENERALEGKAAQLDGLEARMRSVLQAINLQVQIYNTCQ
Download sequence
Identical sequences XP_006892983.1.29581

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