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Domain assignment for XP_007968424.1.81039 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_007968424.1.81039
Domain Number 1 Region: 122-365
Classification Level Classification E-value
Superfamily vWA-like 6.52e-84
Family Integrin A (or I) domain 0.000000445
Further Details:      
 
Domain Number 2 Region: 336-452
Classification Level Classification E-value
Superfamily Integrin domains 2.41e-18
Family Integrin domains 0.0013
Further Details:      
 
Domain Number 3 Region: 621-697
Classification Level Classification E-value
Superfamily Integrin beta tail domain 4.18e-18
Family Integrin beta tail domain 0.0022
Further Details:      
 
Domain Number 4 Region: 22-81
Classification Level Classification E-value
Superfamily Plexin repeat 0.000000000000628
Family Plexin repeat 0.0021
Further Details:      
 
Domain Number 5 Region: 535-575
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000109
Family Integrin beta EGF-like domains 0.00076
Further Details:      
 
Domain Number 6 Region: 579-618
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000179
Family Integrin beta EGF-like domains 0.01
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_007968424.1.81039
Sequence length 769
Comment PREDICTED: integrin beta-2 isoform X4 [Chlorocebus sabaeus]; AA=GCF_000409795.2; RF=representative genome; TAX=60711; STAX=60711; NAME=Chlorocebus sabaeus; AL=Chromosome; RT=Major
Sequence
MLGLRPPLLALVGLLSLGCVLSQECTKFKVSSCRECIESGPACTWCQKLNFTGPGDPDSI
RCDTRPQLLMRGCPADDIMDPRSLAETQENHDGGQTQLSPQKVTLYLRPGQAAEFTVTFR
RAKGYPIDLYYLMDLSYSMLDDLRNVKKLGGDLLQALNEITESGRIGFGSFVDKTVLPFV
NTHPDKLRNPCPNKEKECQAPFAFRHVLKLTSNSNQFQREVGKQLISGNLDAPEGGLDAM
MQVAACPEEIGWRNVTRLLVFATDDGFHFAGDGKLGAILTPNDGRCHLEDNMYKKSNEFD
YPSVGQLAHKLAENNIQPIFAVTRKMVKTYEKLTEIIPKSAVGELSDDSSNVVQLIKNAY
NKLSSRVFLDHNALPDTLKVTYDSFCSNGVTLKDQSRGDCDGVQINVPVTFRVKVTATEC
IQEQSFVIRALGFTDTVTVRVLPQCECRCRDQSRDRSFCHGKGFLECGICRCDTGYIGKT
CECQTQGRSSQELEGSCRKDNNSVICSGLGDCVCGQCLCHTSDVPGKMIYGQYCECDTVN
CERYNSQVCGGPGRGRCFCGKCQCVQGFEGSACQCERTTEGCLNPRRVECSGRGRCRCNV
CQCERNYQPPLCQECPGCSSPCGEHISCAECLKFDKGPFGKNCSAACQRLQLSNNPVKGR
TCKERDSEGCWVTYMLEQQDGWDRYIIYVDESRECVAGPNIAAIVGGTVAGIVLIGVLLL
VIWKALTHLSDLREYRRFEKEKLKSQWNNDNPLFKSATTTVMNPKFAES
Download sequence
Identical sequences XP_007968424.1.81039

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