SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for XP_008676668.1.34533 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_008676668.1.34533
Domain Number 1 Region: 127-225
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 7.46e-23
Family B3 DNA binding domain 0.0075
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_008676668.1.34533
Sequence length 232
Comment uncharacterized protein LOC100216848 isoform X2 [Zea mays]; AA=GCF_000005005.2; RF=representative genome; TAX=4577; STAX=4577; NAME=Zea mays; cultivar=B73; AL=Chromosome; RT=Major
Sequence
MAEATPYEEQRRRQVEANKRKLEELQLHHLSAAIREAAAAAKPSLVKKRKARVPLDVADA
VMEPVRRSGRLANLPDKPVYREKVPDFGMKIRRTYGSVRRDLTNRVYATDDARSYAISKA
EDLEQELDSSFPIFIKPMTQSHVTGGFWLGLPIHFCRKYLPKRDEMITLVDEDDDESDTL
YLAMKRGLSAGWRGFAVQQKLVDGDCLVFQLIEQTKFKVYITRASSYYESED
Download sequence
Identical sequences XP_008676668.1.34533 XP_020406913.1.34533 GRMZM2G106673_T06|PACid:20856930 GRMZM2G106673_P06

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]