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Domain assignment for XP_008767481.1.100692 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_008767481.1.100692
Domain Number 1 Region: 182-334
Classification Level Classification E-value
Superfamily Cap-Gly domain 5.76e-43
Family Cap-Gly domain 0.0000000807
Further Details:      
 
Domain Number 2 Region: 38-132
Classification Level Classification E-value
Superfamily Cap-Gly domain 1.28e-34
Family Cap-Gly domain 0.00000299
Further Details:      
 
Weak hits

Sequence:  XP_008767481.1.100692
Domain Number - Region: 777-886
Classification Level Classification E-value
Superfamily Myosin rod fragments 0.000445
Family Myosin rod fragments 0.0028
Further Details:      
 
Domain Number - Region: 1352-1386
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.00698
Family Retrovirus zinc finger-like domains 0.0063
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_008767481.1.100692
Sequence length 1391
Comment PREDICTED: CAP-Gly domain-containing linker protein 1 isoform X11 [Rattus norvegicus]; AA=GCF_000001895.5; RF=representative genome; TAX=10116; STAX=10116; NAME=Rattus norvegicus; strain=mixed; AL=Chromosome; RT=Major
Sequence
MSMLKPSGLKAPTKILKPGSTALKTPAAAAAPLEKTVPSEKASGPPSSETQEEFVDDFRV
GERVWVNGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEPLKGIFTR
PSKLTRKVQAEDEANGLQTAHARAASPLSTAAATMVSSSPATPSNIPQKPSQPVAKETSA
TPQISNLTKTASESISNLSEAGSVKKGERELKIGDRVLVGGTKAGVVRFLGETDFAKGEW
CGVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKVTKIGFPSTTPAKAKAAAVRRVMA
TTPASLKRSPSASSLSSMSSVASSVSSKPSRTGLLTETSSRYARKISGTTALQEALKEKQ
QHIEQLLAERDLERAEVAKATSHVGEIEQELALARDGHDQHVLELEAKMDQLRTMVEAAD
REKVELLNQLEEEKRKVEDLQFRVEEESITKGDLEVATVSEKSRIMELEKDLALRVQEVA
ELRRRLESSKPPGDVDMSLSLLQEISALQEKLEVTHTDHQNEVTSLKDHFGTREEMFQKE
IKALHAATEKLSKENESLRSKLDHANKENSDVIALWKSKLETAIASHQQAMEELKVSFSK
GIGTDSAEFAELKTQIERLRLDYQHEIESLQSKQDSERSAHAKEMESMKAKLMKIIKEKE
DSLEAVKARLDTAEDQHLVEMEEMLSKLQEAEIKVKELEVLQAKYSEQTQVVGHLTSQLS
VVEEQLLDLDALRKANSEGKLEIETLRQQLEGAEKQIKNLEMERNAESSKANSITKDLQG
KELMLTSLQSNLNEVNQVKETLEKELQTLKEKFASASEEAVSTQTSMQDTVNKLHQKEEQ
FNMLSSELEKLRENLTDMEAKFKEKDEREDQLVKAKEKLENDIAEIMKMSGDNSSQLTKM
NDELRLKERSVEELQLKLTKANENASLLQKSIGEVTLKAEQSQQEAAKKHEEEKKELENK
LLELEKKMETSHYQCQDLKAKYEKASSETKIKHEEILQNFQKMLVDTEDKLKAAQEANRD
LMQDMEELKSQADKAKAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQSELDTLK
ENNLKTVEELNKSKELLNEENQKMEEFKKEIETLKQAAAQKSQQLSALQEENVKLAEELG
RTRDEVTSHQKLEEERSVLNNQLLEMKKRESEYRKDADEEKASLQKSISLTSALLTEKDA
ELEKLRNEVTVLRGENASAKSLHSVVQTLESDKVKLELKVKNLELQLKENKRQLSSSSGN
TDVQTEEDERAQESQIDFLNSVIVDLQRKNQDLKMKVEMMSEAALNGNGEDPNSYDSDDQ
EKQSKKKPRLFCDICDCFDLHDTEDCPTQAQMSEDPPHSTHHGSRSEERPYCEICEMFGH
WATNCNDDETF
Download sequence
Identical sequences ENSRNOP00000001685 XP_008767481.1.100692 10116.ENSRNOP00000001683

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