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Domain assignment for XP_008941979.1.37566 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_008941979.1.37566
Domain Number 1 Region: 139-381
Classification Level Classification E-value
Superfamily vWA-like 1.89e-83
Family Integrin A (or I) domain 0.000000192
Further Details:      
 
Domain Number 2 Region: 640-728
Classification Level Classification E-value
Superfamily Integrin beta tail domain 3.79e-22
Family Integrin beta tail domain 0.00076
Further Details:      
 
Domain Number 3 Region: 354-470
Classification Level Classification E-value
Superfamily Integrin domains 2.82e-21
Family Integrin domains 0.0011
Further Details:      
 
Domain Number 4 Region: 27-84
Classification Level Classification E-value
Superfamily Plexin repeat 0.000000000000392
Family Plexin repeat 0.0023
Further Details:      
 
Domain Number 5 Region: 598-638
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000725
Family Integrin beta EGF-like domains 0.0041
Further Details:      
 
Domain Number 6 Region: 556-594
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000106
Family Integrin beta EGF-like domains 0.0038
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_008941979.1.37566
Sequence length 800
Comment PREDICTED: integrin beta-1, partial [Merops nubicus]; AA=GCF_000691845.1; RF=representative genome; TAX=57421; STAX=57421; NAME=Merops nubicus; AL=Scaffold; RT=Major
Sequence
TNLNFLTWAGIFCCLIWNGFAQQGGSDCIKANAKSCGECIQAGPNCGWCKKTDFLQEGEP
TSARCDDLAALKTKGCPPEDIENPRGSKRLLENREVTNRKIGAAEKLDPQDITQIQPQKL
LLKLRVGEPQTFSLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTALMLEMEKITSD
FRIGFGSFVEKTVMPYISTTPAKLRNPCTGDQNCTSPFSYKNVLSLTSEGNKFNELVGKQ
HISGNLDSPEGGFDAIMQVAVCGEQIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDG
KCHLENNMYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQAVYKELKNLIPKSAVGT
LSSNSSNVIQLIIDAYNSLSSEVILENTKLPKGVTISYKSFCKNGVNDTQEDGRKCSNIS
IGDEVKFEINITANECPKKGQNETIKIKPLGFTEEVEINLEFVCECQCQSEGEPNSPACH
EGNGTFECGACRCNEGRIGRLCECSTDEVNSEDMDAYCRRENSTEICSNNGECICGQCVC
KKRENTNEVYSGKYCECDNFNCDRSNGLICGGNGICKCRVCECFPNFTGSACDCSLDTTP
CMASNGQICNGRGTCECGTCNCTDPKFQGPACETCQTCLGVCAEHKDCIQCRAFDKGEKK
ETCSQECMYFNMTRVESRDKLPQPGQPDPLSHCKEKDIDDCWFYFTYSVNSNGEASVHVV
ETPECPSGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTG
ENPIYKSAVTTVVNPKYEGK
Download sequence
Identical sequences XP_008941979.1.37566

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