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Domain assignment for XP_009889207.1.48241 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_009889207.1.48241
Domain Number 1 Region: 973-1259
Classification Level Classification E-value
Superfamily Terpenoid cyclases/Protein prenyltransferases 2.75e-96
Family Complement components 0.0000000124
Further Details:      
 
Domain Number 2 Region: 1485-1635
Classification Level Classification E-value
Superfamily TIMP-like 9.42e-45
Family Netrin-like domain (NTR/C345C module) 0.00049
Further Details:      
 
Domain Number 3 Region: 1332-1486
Classification Level Classification E-value
Superfamily Alpha-macroglobulin receptor domain 3.27e-39
Family Alpha-macroglobulin receptor domain 0.00079
Further Details:      
 
Domain Number 4 Region: 650-719
Classification Level Classification E-value
Superfamily Anaphylotoxins (complement system) 7.06e-22
Family Anaphylotoxins (complement system) 0.0013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_009889207.1.48241
Sequence length 1637
Comment PREDICTED: complement C3 [Charadrius vociferus]; AA=GCF_000708025.1; RF=representative genome; TAX=50402; STAX=50402; NAME=Charadrius vociferus; AL=Scaffold; RT=Major
Sequence
MTAGVPRVTMVTPAVLRLETEERVVLEAPGLTAPAEATLLVQDFPLKRHVLYQIRMQLSP
NEGMLASTTVKVSAKALPQAVGKQFVSLTARVAQVTLEKVLLVSLQSGHIFLQTDKPIYT
PGSTVLCRLFALNHLMEPAPKTVVVEVKTPDNVIIKQVPVSSPMKTGILSLNHNLPEVVS
LGTWTIMAKFEDSPEQLFSTQFEVKEYVLPSFEVILEPEEKFLYIDREEDFRVSITARYL
YGKRLQGTAFVLFGVMVDDEKKSIPQSLRRVEVIDGDGEAVLSMATLRERFANPHELVGH
SLYVSVTVLTESGSDMVEAQRSGIRIVTSPYTIHFTHTPKYFKPGMPFDLTVYVTNPDES
PAPRVTVKADGFQGVVSTQGDGTAKLVLNMPANKDSVPITVRTDQAGLPPDRQALRKMTA
EAYRSQSGSGNLLHLAIAATELKPGDNLAVNFHLKSNSNAVRDSVPYFTYLIMSKGRIIR
VGRQRHEAGQSLVTMSLPVTAELIPSFRIVAYYFVMPGEIVADSVWVDVKDTCMGTLVVK
GATEADNRVHEPGTPMRLRIEGDHNAYVGLVAVDKGVFVLSKKNKLTQSKVWDTVEKSDI
GCTPGSGRDNVGVFADAGLSLVTNVKITTPPRAEVQCSQPAKRKRRSLQLIEYKGSKAAE
YTDKMLRKCCEDGMKENPMGHSCEYRTNYIQDGEACVRAFLDCCNYIKGIRDKKQREFHL
ELARSEEDDDFLDDRDITSRSLFPESWLWQVEPLTEEPNQLGISTKTLPVYLKDSITTWE
VLAVSLSPTKGLCVADPYEITVMKEFFIDLRLPYSVVRNEQVEIRAILYNYWTHDITVRV
ELMHNPALCSASTSKMRYQQILKLKAQSSWAVPFVIVPLHLGLHDVEVKAAVRGSFVADG
VKKKLKVVPEGMRLEKTVKIVELDPQKKGVNGVQEEKVRAANLSDIVPNTESETKVSIQG
NPVSIMVEKAIDGDKLKHLIVTPAGCGEQNMIGMTPTVIATHYLDSTLQWETFGVDRRTE
AINLIKKGYTQQLAFRKADSSYAAFKNRPSSTWLTAYVAKVFAMAIKLVDIEPEVVCGAV
KWLILEKQKPDGIFQEDAPVIHREMVGGYEGAEPEVSLTAFVLIALQEARAVCKDHVNSL
DGSITKAAEYLARRYQSLNRPYTVALSSYALALTGKLKSEKVLMKFSKEGKRWEERNAHT
YNIEGTSYALLALLQMEKPELTGPVARWLAQQNYFGGGYGSTQATILVFQALAQYQVATP
RQLELNLDVSVLLPRRASAITYRIENRNALVARSAETKLNEDFTVKAEGMGKGTMTVVTV
YNAKVPEKDDKCDNFDLQVQVEDVKIGKEEDGVIRSVKITICARYLDNVDATMSILDVSM
LTGFSPDIQDLKRLTEGVDRYISKFEMDQALADRSNLVIYLDKISHKAEECFSFKAHQRF
RVGLIQPAAVTVYSYYKIDDRCTRFYHPDKNKGQLSKICYGDVCRCAEENCFERQKEDVP
ITVNQRIERACEPGVDYVYKVKLMAVEQTPSHDNYIMTVLSVIKMGTDEDPAGSNRTFVS
HQQCRDALRLQIGQDYLLWGLATDLWVTGNRFSYLIGKDTWLETWPSEVACQEPDLQTLC
QDFIEFAESMTMFGCPS
Download sequence
Identical sequences XP_009889207.1.48241

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