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Domain assignment for XP_010565279.1.12557 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_010565279.1.12557
Domain Number 1 Region: 127-368
Classification Level Classification E-value
Superfamily vWA-like 9.21e-83
Family Integrin A (or I) domain 0.000000371
Further Details:      
 
Domain Number 2 Region: 379-454
Classification Level Classification E-value
Superfamily Integrin domains 3.82e-20
Family Integrin domains 0.00095
Further Details:      
 
Domain Number 3 Region: 623-701
Classification Level Classification E-value
Superfamily Integrin beta tail domain 8.76e-16
Family Integrin beta tail domain 0.0029
Further Details:      
 
Domain Number 4 Region: 26-83
Classification Level Classification E-value
Superfamily Plexin repeat 0.000000000000466
Family Plexin repeat 0.0017
Further Details:      
 
Domain Number 5 Region: 537-577
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000523
Family Integrin beta EGF-like domains 0.0029
Further Details:      
 
Domain Number 6 Region: 581-621
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000502
Family Integrin beta EGF-like domains 0.018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_010565279.1.12557
Sequence length 773
Comment PREDICTED: integrin beta-2 [Haliaeetus leucocephalus]; AA=GCF_000737465.1; RF=representative genome; TAX=52644; STAX=52644; NAME=Haliaeetus leucocephalus; AL=Scaffold; RT=Major
Sequence
MSRDCCLWLLAVTWVLLLVTTAFAMECPKIKVGTCKDCIQSGPGCAWCKKPSFTKAGEPD
SIRCDTMEQLQQRGCLRNEIEFPVNSIKITQNSPLSSDTQLTPQEVHLKLRIGQPAVFEV
KFRRAMGYPIDLYYLMDLSYSMLDDLEKVKKLGGELLRALESTTPSRRIGFGSFVDKTVL
PFVNTHPEKLQNPCPNKDKKCQPPFAFKHILSLTDNAKKFESEVGKQLISGNLDAPEGGL
DAMMQAAVCGDLIGWRNVTRLLVYATDDGFHFAGDGKLGAILTPNDGQCHLEDNMYKKSN
EFDYPSVGQLVQKLAENNIQPIFAVTSKMVDVYKKLSEMIPKSAVGELNEDSSNIIELIQ
VAYNNLSSRIILDHSTLPDVLDVKYDSICSKDKVILDAARGECDNVKINDEVTFKVKVTA
KECIKSQSFTIRPLGFTDTLTVHLDSNCNCNCSEQPDPTACSGKGSIVCGICSCNSGYTG
KNCECETKGKTSKELEGSCRKDNSSVICSGLGDCVCGQCICHTSDVPDKQIYGTFCECDN
MNCEFHNGSPCGGKDRGKCDCGECKCTPGYQGSACQCRKSTDGCLNSRRNECSHRGTCHC
NRCQCRDGYQPPFCQDCPGCPSPCGRYVSCVECKAFLSGPFEKNCSQACPNIQVTQKLTG
VSRQCREKDSQNCWISFRMVQEDGEEIYTIAVDPEKECPEPPNIALIVGGTVAGVALIGL
VLLLIWRLLTELFDRREYRRFEKEKSKAKWNDADNPLFKSATTTVVNPRFNGQ
Download sequence
Identical sequences XP_010565279.1.12557

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