SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for XP_010596320.1.64505 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_010596320.1.64505
Domain Number 1 Region: 52-101
Classification Level Classification E-value
Superfamily Transcription factor IIA (TFIIA), beta-barrel domain 2.88e-19
Family Transcription factor IIA (TFIIA), beta-barrel domain 0.0000808
Further Details:      
 
Domain Number 2 Region: 3-53
Classification Level Classification E-value
Superfamily Transcription factor IIA (TFIIA), alpha-helical domain 7.85e-18
Family Transcription factor IIA (TFIIA), alpha-helical domain 0.0000867
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_010596320.1.64505
Sequence length 109
Comment PREDICTED: transcription initiation factor IIA subunit 2 [Loxodonta africana]; AA=GCF_000001905.1; RF=representative genome; TAX=9785; STAX=9785; NAME=Loxodonta africana; AL=Scaffold; RT=Major
Sequence
MAYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFRG
SLNTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGKNTGSSTTE
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Identical sequences H0WVI0 K9IG60
ENSOGAP00000006320 XP_003418382.1.64505 XP_003784440.1.62490 XP_004709520.1.18182 XP_010596316.1.64505 XP_010596317.1.64505 XP_010596318.1.64505 XP_010596319.1.64505 XP_010596320.1.64505 ENSOGAP00000006320

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