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Domain assignment for XP_011520172.1.92137 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_011520172.1.92137
Domain Number 1 Region: 41-306
Classification Level Classification E-value
Superfamily PDB 5.1e-88
Family PDB 0.000000000188
Further Details:      
 
Domain Number 2 Region: 140-297
Classification Level Classification E-value
Superfamily CRAL/TRIO domain 1.54e-61
Family CRAL/TRIO domain 0.0014
Further Details:      
 
Domain Number 3 Region: 46-124
Classification Level Classification E-value
Superfamily CRAL/TRIO N-terminal domain 5.05e-18
Family SCOPe 0.046
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_011520172.1.92137
Sequence length 317
Comment PREDICTED: retinaldehyde-binding protein 1 isoform X2 [Homo sapiens]; AA=GCF_000001405.37; RF=reference genome; TAX=9606; STAX=9606; NAME=Homo sapiens; AL=Chromosome; RT=Patch
Sequence
MSEGVGTFRMVPEEEQELRAQLEQLTTKDHGPVFGPCSQLPRHTLQKAKDELNEREETRE
EAVRELQEMVQAQAASGEELAVAVAERVQEKDSGFFLRFIRARKFNVGRAYELLRGYVNF
RLQYPELFDSLSPEAVRCTIEAGYPGVLSSRDKYGRVVMLFNIENWQSQEITFDEILQAY
CFILEKLLENEETQINGFCIIENFKGFTMQQAASLRTSDLRKMVDMLQDSFPARFKAIHF
IHQPWYFTTTYNVVKPFLKSKLLERVFVHGDDLSGFYQEIDENILPSDFGGTLPKYDGKA
VAEQLFGPQAQAENTAF
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Identical sequences A0A2K5HRF4 P12271
4ciz_A gi|4506541|ref|NP_000317.1| NP_000317.1.87134 NP_000317.1.92137 XP_011520172.1.92137 XP_011803708.1.43180 ENSP00000268125 9606.ENSP00000268125 ENSP00000268125 ENSP00000268125 GO.38705

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