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Domain assignment for XP_011615792.1.43653 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_011615792.1.43653
Domain Number 1 Region: 635-890
Classification Level Classification E-value
Superfamily YWTD domain 3.53e-55
Family YWTD domain 0.00000406
Further Details:      
 
Domain Number 2 Region: 21-280
Classification Level Classification E-value
Superfamily YWTD domain 7.32e-54
Family YWTD domain 0.00000227
Further Details:      
 
Domain Number 3 Region: 334-572
Classification Level Classification E-value
Superfamily YWTD domain 2.09e-52
Family YWTD domain 0.00000356
Further Details:      
 
Domain Number 4 Region: 938-1198
Classification Level Classification E-value
Superfamily YWTD domain 3.92e-39
Family YWTD domain 0.0000424
Further Details:      
 
Domain Number 5 Region: 1328-1366
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000759
Family LDL receptor-like module 0.0013
Further Details:      
 
Domain Number 6 Region: 893-940
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000279
Family EGF-type module 0.012
Further Details:      
 
Domain Number 7 Region: 1250-1289
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000825
Family LDL receptor-like module 0.00096
Further Details:      
 
Domain Number 8 Region: 1290-1326
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000144
Family LDL receptor-like module 0.0016
Further Details:      
 
Domain Number 9 Region: 288-330
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000026
Family EGF-type module 0.007
Further Details:      
 
Domain Number 10 Region: 592-637
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000995
Family EGF-type module 0.0086
Further Details:      
 
Domain Number 11 Region: 1207-1259
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000806
Family EGF-type module 0.013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_011615792.1.43653
Sequence length 1618
Comment PREDICTED: low-density lipoprotein receptor-related protein 6, partial [Takifugu rubripes]; AA=GCF_000180615.1; RF=representative genome; TAX=31033; STAX=31033; NAME=Takifugu rubripes; AL=Chromosome; RT=Major
Sequence
MGVALRTLLLWSFCCLVRGVPLLLYANRRDLRLVDAAHEKANATVVVGGLEDAAAVDYVY
SQGLIYWSDVSEEAIKRTVFNQSGAHTVQTVIPGLASPDGLACDWLGRKLYWTDSETNRI
EVAELDGSMRKILFWQELDQPRAIALDPERGFMYWTDWGEIPKIERAGMDGTNRSMIIDK
EIYWPNGLTLDYGQQKLYWADAKHSFIHRCDLDGSSREVVVKGDLPHPFALTLYEDTLFW
TDWNTHSIHSCSKHTGGEQRVVHANIFSPMDIHVFSEERQNTPGASSPCLLNNGGCSHLC
LLSPSSPSYQCACPTGVQLLADGRTCRDGATQVLLLARRTDLRRISLDTPDFTDIVLQVD
DIRHAIAIDYDPVDGYIYWTDDDVKAIRRSRLDGSDAQFVVTSQVNHPDGIAVDWIARNL
YWTDTGTDRIEVTRLNGTMRKILISEDLDEPRAIVLDPVAGYMYWTDWGEVPKIERADLD
GMERVVMVNTSLGWPNGLALDYDERKIYWGDAKTDKIEVMHMDGTGRRVLVEDKLPHIFG
FTLLGDFIYWTDWQRRSIERVHKRTAEREFIIDQLPDLMGLKATSVRQAAGSNACAHSNG
GCSHLCLFKPQGVQCGCPIGLELIADMRTCIVPEAFLLFSRHTDIRRISLETNNNNVAIP
LTGVKEASALDFDVTDNRIYWTDITLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGK
NLYWADTGTNRIEVAKLDGQHRQVLVWKDLDSPRALALDPAEGYMYWTEWGGKPKIDRAA
MDGSGRITLVADVGRANGLTIDYAERRLYWTDLDTTLIESSNMLGQDREVIADDLQHPFG
LTQYQDYIYWTDWSQRSIERANKTSGQNRTLIQGHLDYVMDILVFHSSRQGGWNACSSTN
GHCSHLCLAVPVSSFVCGCPAHFSLNEDNKTCSAPTSFLLFSQKTAINRMVIDEQQSPDI
ILPIHSLRNVRAIDYDPLDKQLYWIDSKQNVIRRAQEDGNQSVTVVSGLMGGPSQGIQLY
DLSIDIYSRFIYWTSEVTNVINVTRTDGSRVGVVLRGEQDKPRAIVVNPERGYMYFTNLL
ERSPKIERAALDGTEREVLFFSGLGKPVALAIDNEVGKLFWVDSDLRRIESSDLSGANRI
VIADSNILQPVGLTVFGKHLYWIDKQQQMIERIDKTTREGRTKVQARVPYLSDIHAVNEL
DMREYSKHPCTWDNGGCSHICIVKGDGTTRCSCPVHLVLLQDELSCGDPPTCSPEQFSCT
SGEVDCIPRAWRCDGFAECDDSSDEEDCPVCSKSEFQCDSRQCIDLSLRCNGEINCQDRS
DENKCEVRCPSDQFTCSNGQCVGKHKKCDHNMDCTDNSDEFGCYPTEEPPPPPNSTIGSI
VGVVMTLFVVGAAYFVCQRVLCPQMKDDGETVTNDFVVHGPSSVPLGYVPHQSSLTSSLP
GMSRGKSVIGSLSIMGGSSGPPYDRAHVTGASSSSSSSTKGTYFPPILNPPPSPATVRSQ
YTVELGYSSNSPSTHRSYSYRPYTYRHFAPPTTPCSTDVCDSDYTPGRRAPVKSSATVKG
YTSDLNYDSEPFPPPPTPRSQYLSAEENCESCPPSPYTERSYSHHLYPPPPSPCTDSS
Download sequence
Identical sequences XP_011615792.1.43653

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