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Domain assignment for XP_012480325.1.20347 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_012480325.1.20347
Domain Number 1 Region: 53-71,99-360
Classification Level Classification E-value
Superfamily L domain-like 4.17e-51
Family Polygalacturonase inhibiting protein PGIP 0.0053
Further Details:      
 
Domain Number 2 Region: 468-773
Classification Level Classification E-value
Superfamily Protein kinase-like (PK-like) 1.11e-42
Family Protein kinases, catalytic subunit 0.00082
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_012480325.1.20347
Sequence length 854
Comment PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g16250 [Gossypium raimondii]; AA=GCF_000327365.1; RF=representative genome; TAX=29730; STAX=29730; NAME=Gossypium raimondii; AL=Chromosome; RT=Major
Sequence
MVDQRNIGVALVLFYLLLLSLLFKPTVEQRLSSSIEFTALFELRSSLGLKSRDWPRKVDP
CSSWNGIRCENGSVFEINISGFRRTTVGRQNPRFAVDSLVNFTRLVSFNASKFLLPGSIP
DWFGRRLLTLQVLDLRSCNITGVIPSSIGNLSNLSILYLSDNRLTGAIPSSLGRLLSLSV
LDLSNNLLTGSIPPGIGALSQLQILNLSSNSLRFSIPAQLGDLDSLVDLDLSSNSLSGLV
PEDLSGLRNLQRMVLGNNGLTGLLPVNLFRSPSLLQVIVLRNNSFTGELPEVIWSISGLN
LLDISQNNFTTELPNFASYDNATAAVLDISGNKFYGSLTTVLRRFSSMNLSENYFEGSVP
DFVLGNASLGTNCLQNVSNQRTLTDCVSFYGERGLSFDNFGPPPPESGKSNSNRNRIILA
AVLGGAGFIMLLTLFLLLVLRVRTRRRVSHRGIDVGQVCAETTPPSPGLAINFSSLGDLF
TYQQLLQATGNFTEANLIKHGHSGDLFKGILESGLPVVIKRVDLQSIKKEVYLSELDFFN
RFTHTRLVPLLGHCLEKENEKFLVYKYMPNGDLLSSLYRKINSETDGLQSLDWITRLKIA
IGAAEGLSYLHHECTPPIVHRDVRASSILLDDKFEVRLGSLSKFCLQEDDGRQNGITRLL
QLPRSSSERGSSDSSTALCAYDVYCFGMVLLGLVTGNLDMNASSETEMKEWLEQTLPYIS
IYDKELVTKILDPSLLVDEDLLEEVWAMAIMARSCLNLKPSRRPLMRYLLKALENPLRVV
REDHSSSARLRRTSSRGSWNAALFGSWRRSSSDIAASTTRAEGGADHTSSRKHHSKEIFI
FPEPPPQETERLPS
Download sequence
Identical sequences A0A0D2NHZ7
Gorai.005G243800.1|PACid:26804548 XP_012480325.1.20347

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