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Domain assignment for XP_012579934.1.23501 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_012579934.1.23501
Domain Number 1 Region: 29-279
Classification Level Classification E-value
Superfamily Calponin-homology domain, CH-domain 1.32e-93
Family Calponin-homology domain, CH-domain 0.00000302
Further Details:      
 
Domain Number 2 Region: 295-416
Classification Level Classification E-value
Superfamily Spectrin repeat 8.51e-34
Family Spectrin repeat 0.0000843
Further Details:      
 
Domain Number 3 Region: 2175-2294
Classification Level Classification E-value
Superfamily PH domain-like 1.54e-33
Family Pleckstrin-homology domain (PH domain) 0.0000219
Further Details:      
 
Domain Number 4 Region: 1640-1793
Classification Level Classification E-value
Superfamily Spectrin repeat 1.2e-29
Family Spectrin repeat 0.0012
Further Details:      
 
Domain Number 5 Region: 601-741
Classification Level Classification E-value
Superfamily Spectrin repeat 2.26e-29
Family Spectrin repeat 0.00026
Further Details:      
 
Domain Number 6 Region: 1010-1164
Classification Level Classification E-value
Superfamily Spectrin repeat 2.55e-28
Family Spectrin repeat 0.00000315
Further Details:      
 
Domain Number 7 Region: 1851-2005
Classification Level Classification E-value
Superfamily Spectrin repeat 1.44e-27
Family Spectrin repeat 0.0015
Further Details:      
 
Domain Number 8 Region: 815-950
Classification Level Classification E-value
Superfamily Spectrin repeat 7.53e-26
Family Spectrin repeat 0.0032
Further Details:      
 
Domain Number 9 Region: 1532-1675
Classification Level Classification E-value
Superfamily Spectrin repeat 7.2e-25
Family Spectrin repeat 0.0038
Further Details:      
 
Domain Number 10 Region: 1228-1375
Classification Level Classification E-value
Superfamily Spectrin repeat 3.16e-24
Family Spectrin repeat 0.00075
Further Details:      
 
Domain Number 11 Region: 425-526
Classification Level Classification E-value
Superfamily Spectrin repeat 3.72e-22
Family Spectrin repeat 0.00036
Further Details:      
 
Domain Number 12 Region: 745-849
Classification Level Classification E-value
Superfamily Spectrin repeat 3.84e-19
Family Spectrin repeat 0.0017
Further Details:      
 
Domain Number 13 Region: 529-636
Classification Level Classification E-value
Superfamily Spectrin repeat 7.92e-19
Family Spectrin repeat 0.00061
Further Details:      
 
Domain Number 14 Region: 2011-2070
Classification Level Classification E-value
Superfamily Spectrin repeat 0.0000000000173
Family Spectrin repeat 0.0016
Further Details:      
 
Domain Number 15 Region: 1386-1482
Classification Level Classification E-value
Superfamily Spectrin repeat 0.000000000628
Family Spectrin repeat 0.0016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_012579934.1.23501
Sequence length 2331
Comment PREDICTED: spectrin beta chain, erythrocytic isoform X1 [Condylura cristata]; AA=GCF_000260355.1; RF=representative genome; TAX=143302; STAX=143302; NAME=Condylura cristata; AL=Scaffold; RT=Major
Sequence
MTSATEFENVGNQPPYSRINARWDAPDDELDNDNSSARLFERSRIKALADEREVVQKKTF
TKWVNSHLARVSCRITDLYKDLRDGRMLIKLLEVLSGEMLPKPTKGKMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLVLGLIWTIILRFQIQDIVVQTQEGRETRSAKDALL
LWCQMKTAGYPHVNVTNFTSSWKDGLAFNALIHKHRPDLIDFDKLKDSNARHNLEHAFDV
AERQLGIIPLLDPEDVFTENPDEKSIITYVVAFYHYFSKMKVLAVEGKRVGKVIDHAIET
EKMIEKYSGLASDLLTWIEQTITVLNSRKFANSLAGVQQQLQAFSTYRTVEKPPKFQEKG
NLEVLLFTIQSRMRANNQKVYTPHDGKLVSDINRAWESLEEAEYRRELALRNELIRQEKL
EQLARRFDRKAAMRETWLNENQRLVAQDNFGYDLAAVEAAKKKHEAIETDTAAYEERVRA
LEDLAQELEKENYHDQKRITARKDNILRLWSYLQELLRARRQRLETTLALQKLFQDMLHS
IDWMDEIKAHLLSADFGKHLLEVEDLLQKHKLMEADIAIQGDKVKAITAATLQFTEGKGY
QPCDPQVIQDRVSHLEQCFGELSNMAAGRKAQLEQSKRLWKFFWEMDEAESWIKEKEQIY
SSLDYGKDLTSVLILQRKHKAFEDELRGLDAHLEQIFQEAEGMVARKQFGHPQIEARIKE
VSAQWDQLKELAAFRKKNLQDAENFFQFQGDADDLKAWLQDAHRLLSGEDVGQDEGATRA
LGKKHKDFLEELEESRGVMEHLETQAQGFPQEFRDSPDVTKRLQALRELYQQVVAQADLR
RQRLQDALDLYTVFGETDACELWMGEKEKWLAQMEIPDTLEDLEVVQHRFDILDQEMKTL
MSQIDGVNLAANSLVESGHPRSGEVKRYQDHLNTRWQAFQAMVSDRREAVDSALRVHNYC
VDCEETSKWITDKTKVVESTKDLGKDLAGVIAIQRKLSGLERDVAAIQARVGALERESQR
LMQSHPELKEDIGRRQAYVEELWQGLQAALKGQEASLGEASQLQAFLQDLDDFQAWLSMA
QKAVASEDTPESLPEAEQLLQQHAAIKDEIDGHQDSYQHVKASGEKVIHGQTDPEYLLLG
QRLEGLDSGWDALRRMWESRGRSLAQCLGFQEFQKDAKQAEAILSNQEYTLAHLEPPDSL
EAAEAGIRKFEEFLVSMENNREKILSPVDSGNKLVAEGNLYSDKIKEKVQLIEDRYRRNE
ERAQEGSVLLRDNLELQDFLQNCQELTLWINDKLLTSQDVSYDEARNLHNIWLKHQAFVA
ELASHQGWLENIDAEGKQLMEEKPQFVAVVSQRLEALHRLWDELQATTQEKAKHLSAARS
SDLRSQTHADLNKWISAMEDQLRSDDPGKDLTSVNRMLAKLKRVEDQVNVRKEELGELFA
QVPSVGEEEGGADLSIEKRFLDLLEPLGRRKKQLESSRAKLQISRDLEDETLWVEERLPL
AQSADYGTNLQSVQLFMKKNQTLQNEILGHAPRVEDVLQRGQQLVEAAEIDCQDIEERLG
HLQGSWDTLREAAAGRLQRLRDASEAQQYYLDAGEAEAWISEQELYVISDETPKDEEGAV
VMLKRHLRQQRAVEEYGRNIKQLAGRAQTLLSAGHPEGEQIIRLQGQVDKQYAGLKDMAE
ERKRKLENMYHLFQLKREADDLEQWIAEKELVASSPEMGQDFDHVTLLRDKFRDFARETG
AIGQERVDNVNAIIERLIDAGHGEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLH
RYFYTGAEILGLIDEKHRELPEDVGLDASTAESFHRVHTAFERELHLLGVQVQQFQDVAT
RLQTAYAGEKADAIQNKEQEVSAAWQALLDACAGRRTQLVDTADKFRFFSMVRDLLSWME
SIIRQIETQERPRDVSSVELLMKYHQGIRAEIETRSKNFSACLELGESLLQRQHQASEEI
REKLRQVVSRRKEMNEKWEARWERLRMLLEVCQFSRDASVAEAWLIAQEPYLASRDFGHT
VDSVEKLIKRHEAFEKSTASWAERFAALEKPTTLELKERQTPERPAEETGPQEEEGETAG
EAPRPHRAATERTSPQGEEERQWPQDLQPPPPPGPHTAGQEDKAGGDERPTTEPLYKVLD
TPLSEGDEPSTLPAQRDRGHSVQMEGYLGRKHDLEGPHKKASNRSWNNLYCVLRNSQLTF
YKDAKNLALGVPYHGEEPLALRHAVCEVAANYKKKKHVFKLRLSNGSEWLFHGKDEEEML
SWLQGVSTAINEAQSIRVKAQSLPLPSIMGPDASLGKKDKEKRFSFFPKKK
Download sequence
Identical sequences XP_012579934.1.23501

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