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Domain assignment for XP_012771616.1.88231 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_012771616.1.88231
Domain Number 1 Region: 876-924
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000123
Family Laminin-type module 0.0067
Further Details:      
 
Domain Number 2 Region: 1029-1078
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000187
Family Laminin-type module 0.0017
Further Details:      
 
Domain Number 3 Region: 922-972
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000307
Family Laminin-type module 0.0064
Further Details:      
 
Domain Number 4 Region: 272-341
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000335
Family Laminin-type module 0.029
Further Details:      
 
Domain Number 5 Region: 402-451
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000184
Family Laminin-type module 0.017
Further Details:      
 
Domain Number 6 Region: 1138-1181
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000137
Family Laminin-type module 0.021
Further Details:      
 
Domain Number 7 Region: 982-1031
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000273
Family Laminin-type module 0.079
Further Details:      
 
Domain Number 8 Region: 503-541
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000419
Family Laminin-type module 0.022
Further Details:      
 
Domain Number 9 Region: 339-404
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000053
Family Laminin-type module 0.063
Further Details:      
 
Domain Number 10 Region: 1081-1135
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000335
Family Laminin-type module 0.0069
Further Details:      
 
Domain Number 11 Region: 454-495
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000053
Family Laminin-type module 0.01
Further Details:      
 
Domain Number 12 Region: 1186-1233
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000156
Family Laminin-type module 0.0087
Further Details:      
 
Domain Number 13 Region: 828-869
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000893
Family Laminin-type module 0.018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_012771616.1.88231
Sequence length 1812
Comment PREDICTED: laminin subunit beta-4-like isoform X2 [Maylandia zebra]; AA=GCF_000238955.2; RF=representative genome; TAX=106582; STAX=106582; NAME=Maylandia zebra; ecotype=Mazinzi reef; AL=Scaffold; RT=Major
Sequence
MIFHFFIVCLSAAFLPAVHLQDYKDFQDPCPISSCNPQLGDLLVGRAAQLSASSTCGLDG
PQNYCIIGYLEEGQKCFTCDSRLPYHRYNSPNSHRIENVITNFDLERKLKWWQSETGVHN
VSIQLNLETMFQFSHLVLRFKSFRPAAMLVERSRDFGRSWTVVRYFAEDCSLHFPSVSTA
PARSIDDVVCDSRYSGSEPSLVGEVVLKALDPVFKTENPHAPNIHDLTTVTNIRVNFTRL
FTLGDTLLSRKRRNPQDKYYYSVYNMVVQGSCFCNGHASQCVPMAGVHRDVFTQPGMVHR
QCVCKHNTAGENCERCQDFHNDSPWKPGGEGAADICRACNCHSHSDSCHFDAARYEATGG
VSGGVCDDCGNNRMGPQCEQCQPFLYQDPQRAKDDPQACIPCNCDPAGSRGGGQCDALSG
QCVCKENVEGQRCDRCKHGFFSLRQDDPTGCQACRCHPLGSVGSCDQLTGTCECDPMASG
PLCDRCLPDFWGLGNSVFRCSPCNCDIGGAHGSTCSPEDGQCRCLPNMIGRRCSDPAPGY
FLPALNYFLYEAELTFPLLGGRSSTIPPPSPSSSADPSSSSRLNPRVLPQCEQYFKEQGF
DTKFQNGRVILVRRARQLAQQQKMRKRLQTSIPLVPGYTLQIIPRQRASHQPVTWTGLGL
VRVFEGVGLRFTVDNLHSSTDYQLAISYEPESASDWMAIVSIGKVSPGDGGCSSNPTGSK
TVILPGNSRRGILDSLLCLNAGGQYFVDITFYKQPRSDSSHILIDSISLFNRIGSVQNFC
SQSDLDTFHQFHCTGLAVKPGPQESLPEVCEGLIVSLSAQIHNGAVLCRCNVIGSTGPSC
SKLGGFCDCKANVIGRCCDACAPMTFGFGPEGCKRCNCDPHGSVSELCDQVSGQCACRSE
ITGQRCKRCQMGFWGFPSCRSCECNGLSEVCDGFTGDCLNCREHTTGPSCERCVEGYYGD
PISRQACQPCLCPDVLSSGRFFATSCQHDPQSLRLICKCQEGHTGVSCDSCSPGFYGDLT
LPGAVCKECPCNNNIDPDDPNSCNSTTGECLHCLHNTIGLHCQHCKPGYHGNALTQDCKE
CSCDRRGTQETRCPLGRPCFCDPRTGQCPCRTGVIGKLCDECEDRYWNLNIASGCQPCSC
DLIKSISNICDKVTGHCPCHPEFGGRHCDECRENHFRNPDLQCISCDCNLEGTKQPSCDP
ETGKCICRAGVSGIFCDECTPGFNTLFPACEPCHPCNALWTQIVTDVQRAAQKMRTLIPH
NNVQPTDNQHLQEMINMHSMLDSLANLRVISPPSVEKLEKMSLKVRKVKDAIDTNVILID
MSPLFNTEIDDIHLEIMNLKKKLTSVPTDNVNDQQKARVSSEPVVELLDEIQTLYRFFML
EDERVGNVSKAVEDSMDTRQEVKHKLSMCNTGDLALLKKKVTELSVVQLKQKVCGDPGLE
DCSGCTGALCGRDLGKRKCGSPNCKGAVHVSEDASKTAEKLKDQLMNLPSRLQDTKNKIN
NANEMTWDAKNWARDLQDQINNNTNSCEREKNKIRELIQQVKDYLMDDMVPPKDTEKMAQ
AVLRIELPQSPANIQSMISNVNNLLKNATRFLEDLKNLDKQAKAAMDLQQEALELKEQME
NTDVKKIIQDIYEADKAQAKANNLLERASRNKDETKDRIQDAEDTLDNIEARLMIQTKDL
QKEIEAMKDKTEENRETAREAREVAESALNMTTDAETELSDVTKQFEVLKQNQQNQEVKG
QAAGRLKNIMMEAEDMKRQVEDKLQQIQDMEQKIQQLLHRRNQKAAEVSDLLEMAESIRQ
EISTQVYTECTG
Download sequence
Identical sequences XP_012771616.1.88231

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