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Domain assignment for XP_012915396.1.14098 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_012915396.1.14098
Domain Number 1 Region: 637-892
Classification Level Classification E-value
Superfamily YWTD domain 3.66e-56
Family YWTD domain 0.00000531
Further Details:      
 
Domain Number 2 Region: 25-285
Classification Level Classification E-value
Superfamily YWTD domain 5.62e-55
Family YWTD domain 0.00000161
Further Details:      
 
Domain Number 3 Region: 336-566
Classification Level Classification E-value
Superfamily YWTD domain 6.28e-51
Family YWTD domain 0.00000234
Further Details:      
 
Domain Number 4 Region: 939-1196
Classification Level Classification E-value
Superfamily YWTD domain 6.93e-37
Family YWTD domain 0.0000727
Further Details:      
 
Domain Number 5 Region: 1327-1363
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000707
Family LDL receptor-like module 0.0016
Further Details:      
 
Domain Number 6 Region: 1289-1325
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000445
Family LDL receptor-like module 0.0012
Further Details:      
 
Domain Number 7 Region: 1249-1287
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000576
Family LDL receptor-like module 0.00086
Further Details:      
 
Domain Number 8 Region: 895-946
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000391
Family EGF-type module 0.021
Further Details:      
 
Domain Number 9 Region: 592-638
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000617
Family EGF-type module 0.009
Further Details:      
 
Domain Number 10 Region: 291-333
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000419
Family EGF-type module 0.011
Further Details:      
 
Domain Number 11 Region: 1206-1258
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000931
Family EGF-type module 0.012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_012915396.1.14098
Sequence length 1607
Comment PREDICTED: low-density lipoprotein receptor-related protein 5 [Mustela putorius furo]; AA=GCF_000215625.1; RF=representative genome; TAX=9669; STAX=9668; NAME=Mustela putorius furo; breed=Sable; AL=Scaffold; RT=Major
Sequence
MPRRGTPDSGPVLTYRFPPPPAASPLLLFANRRDVRLVDAGGVKLESTIVVSGLEDAAAV
DFQFSKGAVYWTDVSEEAIKQTYLNQTGVAVQNVVISGLVSPDGLACDWVGKKLYWTDSE
TNRIEVADLNGTSRKVLFWQDLDQPRAIALDPAHGYMYWTDWGETPRIERAGMDGSTRKI
IVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSFRQKVVEGSLTHPFALTLSGD
TLYWTDWQTRSIHACNKRTGEKRKEILSALYSPMDIQVLSPERQPYFHTRCAEDNGGCSH
LCLLSPREPFYTCACPTGVQLHDNGKTCKAGAEEVLLLARRTDLRRISLDTPDFTDIVLQ
VDDIRHAIAIDYDPLEGYVYWTDDEVRAIRRAYLDGSGAQTLVNTEINDPDGIAVDWVAR
NLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPRAIVLHPVMGLMYWTDWGENPKIERAN
LDGQERHILVNTSLGWPNGLALDLQEGKLYWGDAKTDKIEVINVDGTKRRTLLEDKLPHI
FGFTLLGDFIYWTDWQRRSIERVHKVKASRDVIIDQLPDLMGLKAVNVAKAVGTNACADG
NGGCSHLCFFTPHAAKCGCPIGLELLSDLKTCIVPEAFLVFTSRAAIHRISLETNNNDVA
IPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFMNGSSVEHVIEFGLDYPEGMAVDWV
GKNLYWADTGTNRIEVARLDGQFRQVLVWRDLDNPRSLALDPTKGYIYWTEWGGKPRIVR
AFMDGTNCMTLVDKVGRANDLTIDYADQRLYWTDLDTNMIESSDMLGQERVVIADDLPHP
FGLTQYSDYIYWTDWNLHSIERADKTSGRNRTLIQGHLDFVMDILVFHSSRQDGLNDCMH
NNGQCGQLCLAVPGGHRCGCASHYTLDPSSRNCSPPTTFLLFSQKCAISRMIPDDQHSPD
LILPLHGLRNVKAIDYDPLDKFIYWVDGRQNIKRAKDDGTQPFVLTSPSPSQNPDRQPHD
LSIDVYSRMLFWTCEATNTINVHRLNGDAMGVVLRGDRDKPRAIVVNAERGYLYFTNMQD
RAAKIERAALDGTEREVLFTTGLIRPVALVVDNRLGKLFWVDADLKRIESCDLSGANRLT
LEDANIVQPAGLTVLGRHLYWIDRQQQMIERVEKTTGDKRTRVQGRVAHLTGIHAVEEIS
LEEFSAHPCARDNGGCSHICIAKGDGTPRCSCPVHLVLLQNLLTCGEPPTCSPDQFACAT
GEIDCIPGAWRCDGFPECDDQSDEEGCPVCSAAQFPCARGQCVDLRLRCDGEADCQDRSD
EADCDAICLPNQFRCASGQCVLIKQQCDSFPDCIDGSDELMCEITKPPSDDSPAHSSAIG
PVIGIILSLFVMGGVYFVCQRVLCQRYAGASGPFPHEYVSGTPHVPLNFIAPGSSQHGPF
TGISCGKSMMSSVSLMGGRGGVPLYDRNHVTGASSSSSSSTKATLYPPILNPPPSPATDP
SLYNVDMFYSSNIPTTARPYRPYIIRGMAPPTTPCSTDVCDSDYSASRWKASKYYLDLNS
DSDPYPPPPTPHSQYLSAEDSCPPSPATERSYFHLFPPPPSPCTDSS
Download sequence
Identical sequences XP_012915396.1.14098

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