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Domain assignment for XP_012960058.1.99704 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_012960058.1.99704
Domain Number 1 Region: 110-444
Classification Level Classification E-value
Superfamily ARM repeat 1.87e-27
Family Plakophilin 1 helical region 0.085
Further Details:      
 
Domain Number 2 Region: 553-682
Classification Level Classification E-value
Superfamily Toll/Interleukin receptor TIR domain 0.000000000000942
Family Toll/Interleukin receptor TIR domain 0.0064
Further Details:      
 
Domain Number 3 Region: 477-539
Classification Level Classification E-value
Superfamily SAM/Pointed domain 0.0000000886
Family SAM (sterile alpha motif) domain 0.023
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_012960058.1.99704
Sequence length 715
Comment PREDICTED: sterile alpha and TIR motif-containing protein 1 [Anas platyrhynchos]; AA=GCF_000355885.1; RF=representative genome; TAX=8839; STAX=8839; NAME=Anas platyrhynchos; breed=Pekin duck; AL=Scaffold; RT=Major
Sequence
MVLTLLVSVYKLCRFFAMSGMERLEVPECVSQAGCWAAGSSGEHREVSPGVNTDVRAALE
RILPALQRSIACAKQAAGPGELRQAIGEVFQLVEEAWGMPTLGRDVAKVLCDVIRLEGGL
DLLLNLLYTAELETKCQAGKLLEQILVAENRDRIARIGLGVILNLAKERDIPPLAQSVSG
ILEHMFKHTEETCSQLISDGGLDAILYWCRWTDPVVLRHCAMALANCAMHGGQANQRLMI
EKRTAEWLFPLVFSRDDELIRLHACLAITVLATNKEIEKEVERSGTLALVEPFIASLDPE
RFACRMLGSSDSSQGRTAEDLQRLVPLLDSSRLEAQCIAAFYLCAEAAIKTRQKQTKIFS
EIGATQSLKRVVCYSTSSTTSSLAKKVLRMIGEEVPRRILPTVPNWKPCEVQTWLQQIGF
NKYCQSFLDHQVDGDILLRLTEEELQEDLGMGSSITRKRFFRELTELKTFANYSTCDRSN
LADWLGGIDPRFRQYTYNLLTCGINRSFLHRVTEQQLQDDCHIATGFHRVRILSAAREML
HSPITLQTASDGTDVFISYRRSTGSQLASLLKVHLQLHGFSVFIDVEKLEAGKFEDKLIQ
SVLSARNFVLVLSPNALDKCMADPECKDWVHKEIVTALNSGKNIVPVTDHFEWPDPETLP
KDMRAVLKFNGIKWSHEYQEATIDKIIRFLQGRSSRDSSAGSENGLDCLPAPGQT
Download sequence
Identical sequences U3J3U2
XP_012960058.1.99704 ENSAPLP00000014169

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