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Domain assignment for XP_013211135.1.66349 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_013211135.1.66349
Domain Number 1 Region: 77-254
Classification Level Classification E-value
Superfamily Calponin-homology domain, CH-domain 1.67e-67
Family Calponin-homology domain, CH-domain 0.00000302
Further Details:      
 
Domain Number 2 Region: 270-391
Classification Level Classification E-value
Superfamily Spectrin repeat 2.09e-33
Family Spectrin repeat 0.0000925
Further Details:      
 
Domain Number 3 Region: 2148-2267
Classification Level Classification E-value
Superfamily PH domain-like 9.25e-33
Family Pleckstrin-homology domain (PH domain) 0.0000195
Further Details:      
 
Domain Number 4 Region: 1615-1768
Classification Level Classification E-value
Superfamily Spectrin repeat 3.36e-30
Family Spectrin repeat 0.001
Further Details:      
 
Domain Number 5 Region: 984-1139
Classification Level Classification E-value
Superfamily Spectrin repeat 7.86e-30
Family Spectrin repeat 0.00000447
Further Details:      
 
Domain Number 6 Region: 1826-1980
Classification Level Classification E-value
Superfamily Spectrin repeat 6.55e-28
Family Spectrin repeat 0.002
Further Details:      
 
Domain Number 7 Region: 1507-1662
Classification Level Classification E-value
Superfamily Spectrin repeat 2.88e-27
Family Spectrin repeat 0.0027
Further Details:      
 
Domain Number 8 Region: 614-717
Classification Level Classification E-value
Superfamily Spectrin repeat 1.8e-25
Family Spectrin repeat 0.00026
Further Details:      
 
Domain Number 9 Region: 1204-1350
Classification Level Classification E-value
Superfamily Spectrin repeat 7.92e-25
Family Spectrin repeat 0.001
Further Details:      
 
Domain Number 10 Region: 790-925
Classification Level Classification E-value
Superfamily Spectrin repeat 3.99e-24
Family Spectrin repeat 0.0027
Further Details:      
 
Domain Number 11 Region: 400-501
Classification Level Classification E-value
Superfamily Spectrin repeat 3.8e-22
Family Spectrin repeat 0.00036
Further Details:      
 
Domain Number 12 Region: 720-824
Classification Level Classification E-value
Superfamily Spectrin repeat 3.36e-19
Family Spectrin repeat 0.0014
Further Details:      
 
Domain Number 13 Region: 495-615
Classification Level Classification E-value
Superfamily Spectrin repeat 6.54e-19
Family Spectrin repeat 0.00069
Further Details:      
 
Domain Number 14 Region: 1986-2045
Classification Level Classification E-value
Superfamily Spectrin repeat 0.0000000000173
Family Spectrin repeat 0.0016
Further Details:      
 
Domain Number 15 Region: 1361-1452
Classification Level Classification E-value
Superfamily Spectrin repeat 0.000000000681
Family Spectrin repeat 0.0019
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_013211135.1.66349
Sequence length 2304
Comment PREDICTED: spectrin beta chain, erythrocytic isoform X2 [Microtus ochrogaster]; AA=GCF_000317375.1; RF=representative genome; TAX=79684; STAX=79684; NAME=Microtus ochrogaster; AL=Chromosome; RT=Major
Sequence
MPRMMSWITTTAQPGSLRGPGSRPWQMSGKLFKRRPLRNGSTPTWLECPAASAISTRTCG
TGACSSSCWRCSPERCWPTKGKMRIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRL
VLGLIWTIILRFQIQDIVVQTQEGRETRSAKDALLLWCQMKTAGYPHVNVTNFTSSWKDG
LAFNALIHKHRPDLIDFDKLKDSNARHNLEHAFDVAERQLGIIPLLDPEDVFTENPDEKS
IITYVVAFYHYFSKMKVLAVEGKRVGKVIDHAIETEKMIEKYSGLASDLLTWIEQTINVL
NSRKFANSLSGVQQQLQAFSTYRTVEKPPKFQEKGNLEVLLFTIQSRMRANNQKVYTPHD
GKLVSDINRAWESLEEAEYQRELALRSELIRQEKLEQLARRFDRKAAMRETWLNENQRLV
TQDNFGYDLAAVEAAKKKHEAIETDTAAYEERVKALEDLAQELEKENYHDQKRIMARKDN
ILRLWSYLQELLRSRRQRLEATLALQKLFQDMLHSIDWMDEIKAHILSAEFGKHLLEVED
LLQKHKLMEADIAIQGDKVKAITAATLQFTEGKGYQPCDPQVIQDRVSHLEQCFSELSNM
AAGRKAQLEQSKRLWKFFWEMDEAESWIKEKEQIYSSLDYGKDLTSVLILQRKHKAFEDE
LRGLDAHLKQIFQEAEGMVAQKQFGHPQIENRVKEVSAQWDHLKELAACRKKDLQNAEDF
FQFQGDADDLKAWLQDAHRLLSGEDVGQDEGATRALGKKHKDFLEELEESRGVMEHLEHQ
AQGFPEEFRDSPDVTSRLQTLQKLYQQVLAQAELRGQRLQDALDLYTVFGESDACELWMS
EKEKWLNQMDIPNTLEDLEVVQHRFDILDQEMKTLITQIDGVNLAANNLVESGHPRSGEV
KQYQDRLNKRWQDFQAVVSEQREAVDSALRVNNYCVDCEETSKWIVDKTKVVESIKDLGQ
DLAGVISIQRKLSGLERDKLAIQDRVSALQRESQHLMESHPEQKEDIGQRQADVEKLWKG
LQDALQDQELSLGEASKLQAFLQELDDFQAWLSMAQKAVASEDMPESLPEVEQLLQQHAA
IKEEIDAHEENYHQVKASGEKVIEGQRDPEYQLLGQRLEGLDTGWDALRRMWESRGHSLT
QCLGFQEFQKDAKQAEAILSNQEYTLAHLEPPDSLAAAEAGIRKFEDFLGSMENNRHKVL
SPVDSGNKLVAEGNLYSDKIKEKVQLIEDRHKKNNEKAQEVTILLKDNLELQNFLQNCKE
LTLWINDKLLTSPDVSYDEARNLHNKWMKHQAFVAELASHQGWLENIDAEGRQLMEEKPQ
FKDVVSERLDALHKLWDELQTTTKAKTEQLSAARSSDLRLQTHADLNKWIGAMEDQLRSD
DLGRDLTTVNRMLAKLKRVEDQVNLRKEELEELFAEAPLLGAEAGDTDMSIEKRFLDLLE
PLGRRRKQLELSKAKLQISRDLEDEMLWVEERLPLAQSADYGTNLQTVQLFMKKNQTLQN
EILGHAPRVEDVLQRGWQLVTAPEIDCQDVEERLGHLQGSWDTLREAAAGRLQRLRDAHE
AQQYYLDAGEAEAWIGEQELYVFSDEPPKDEEGAIVMLKRHLRQQRAVEEYGRNIKQLAG
RAQNLLSAGHPEGEQIIRLQGQVDKQYAGLKDMAEERRRKLENMYHLFQLKREADDLEQW
ITEKEMVASSQEMGQDFDHVTMLRDKFRDFARETGAIGQERVDNVNAIIERLIDAGHSEA
ATIAEWKDGLNDMWADLLELIDTRMQLLAASYDRHRYFYTGTEILGLIDEKHRELPEDVG
LDASTAESFHRVHTAFERELHLLGVQVQQFQDVATRLQTAYAGENADAIQSKEQEVSAAW
QALLDACAGRRAQLVDTADKFRFFSMVRDLLSWMESIIRQIETQERPRDVSSVELLLKYH
QGIKAEINTRAKNFSTCLELGESLLQRQHQASDEIREKLQQVVSRRQEMNDKWEARSDRL
HMLLEVCQFSRDASVAEAWLIAQEPYLASRDFGHTVDSVEKLIKRHEAFEKSTASWAERF
AALEKPTTLELKERQTPERPAEEPGPQEEEGETAGEPPQVHRAATERTSPGEERGTWPQD
LQPPPLPGHHKDEQERSVGEERPATEPLFKVLDTPLSEGDEPTTLPAQRDLGHTVQMEGY
LGRKHDLEGPNKKASNRSWNNLYCVLRNSQLTFYKDAKNLALGVPYHGEEPLALRHAICE
IAANYKKKKHVFKLRLSNGSEWLFHGKDEEEMLLWLQSMSTAINESQSIRVKAQSLPLPS
LVGPDASLGKKEKEKRFSFFPKKK
Download sequence
Identical sequences XP_013211135.1.66349

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