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Domain assignment for XP_013611935.1.26608 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_013611935.1.26608
Domain Number 1 Region: 2-63
Classification Level Classification E-value
Superfamily SAP domain 7.17e-17
Family SAP domain 0.0038
Further Details:      
 
Domain Number 2 Region: 103-166
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 0.0000000000000775
Family PHD domain 0.0000647
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_013611935.1.26608
Sequence length 854
Comment PREDICTED: E3 SUMO-protein ligase SIZ1 isoform X1 [Brassica oleracea var. oleracea]; AA=GCF_000695525.1; RF=representative genome; TAX=109376; STAX=3712; NAME=Brassica oleracea var. oleracea; cultivar=TO1000; AL=Chromosome; RT=Major
Sequence
MDLEASCKEKLSSFRIKELKDVLTQLGLSKQGKKQDLVERVLTLVSDGQAARLWSKKNTL
AREDVAKLVDDTYRKMQVSGASDLASKGQVSSDTKVKGEPEDSFRQEVKVRCVCGSSLET
DSMIQCEDPRCHVWEHVGCVIVPEKSMDANPPLPEIFYCEVCRLTRADPFLVTVAHPLCP
VRFTPTTISSDGTTPMQSVERTFQITRSDKDLLAKQEYDVQAWCMLLNDKVVFRMQWPQV
AELQINGMLVRPISRPGSQLLGANGRDDGPTIKPYIRDGINRIILSGGDSRRFCFGVRLV
KRRTLQQVLNLIPEETKGETFEDALARVRRCIGGGGGDDNADSDSDIEVVADFFGVNLRC
PMSGSRIKVAGRFLPCVHMGGFDLEVFVELNQRSRKWQCPICLKNYSVEHVIVDPYFNRI
TSKMKHCDEDVTEIEVKPDGSWRVKSKKERELSQWHLPDGSLCPSADEVKRKMETLIPVK
QEGFSDGPTPLKLGIRKNRNGVWEVRKPNTNGFSSSNKVGYQDKNIVPMSSSATGSGRDG
DDASVSQDAIGSFDFGTNGIELDSISMNVDSSYNIPDRNQAGEDVNNDVIVLSDSDEDND
VVITTPGPSYSGCRTDGGVNFPLNPSGIINSYNEDPHTMAGGSSRLGGFNDDDEFVTPLW
PFPSETPEAPLFPLFGSDADVSEGLLGLHHHGGPLNCGPEINGDYTLAPETSMASEAVAN
DGGLVDNPLAFGRDDPSLQIFLPTKPDASAQNGFINQADMSNGIRSDDWISLRLGDSAGG
NHGEATSANGLNSNQQMSTREGCMDATTETASLLLGMNDNNKAKRQRSDKPFSFPRQKRS
VRPRMFLSIDSDSE
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Identical sequences XP_013611935.1.26608

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