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Domain assignment for XP_013636814.1.26608 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_013636814.1.26608
Domain Number 1 Region: 112-255
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 1.44e-47
Family B3 DNA binding domain 0.0051
Further Details:      
 
Domain Number 2 Region: 710-788
Classification Level Classification E-value
Superfamily CAD & PB1 domains 0.00000034
Family PB1 domain 0.034
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_013636814.1.26608
Sequence length 820
Comment PREDICTED: auxin response factor 8 isoform X2 [Brassica oleracea var. oleracea]; AA=GCF_000695525.1; RF=representative genome; TAX=109376; STAX=3712; NAME=Brassica oleracea var. oleracea; cultivar=TO1000; AL=Chromosome; RT=Major
Sequence
MKLSTSGLVQQSHEGEKCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEV
DGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIELGIPSK
QPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSLQPPAQELLARDLHDVEWKFRH
IFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRRAIRPQTIVPSSVLS
SDSMHIGLLAAAAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRML
FETEESSVRRYMGTITGISDLDSVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT
FPMYPSLFPLRLKRPWHAGTSSLHDGRGELGSGLPWLRGGGGGEQQGLLPLNYPSVGLFP
WMQQRLDLAQLGTDNNQQYQAMLAAGLQNMGGGDPLRQQFVQLQEPPPSHHQYLQQSASH
NSDLMLQQQQQHHLMHAQTQIMCENLPQRQEVSKQQPAGGGGQQSVDQNAYLNALKMQNG
QLQQWQQHSDMPSPSSFMKADFTDKFATTASPIQQNSASPGSGHGSNLLNFSITGQSALP
EQLIGEGWSPKASNTFSEPLSLPPQAYAGKSLALEPASANVNPSVFGVDPGSGLFLPSTV
PRFASSSSGGDVEAYPMSLADSGFENSLYNSCMQDTTHELLHGVGQINPSNQTKNFVKVY
KSGSVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVDKENDILLLGDDP
WESFVSNVWYIKILSPEDVQEMGDHGEGSGGSLPQNPTHL
Download sequence
Identical sequences A0A0D3BZD9
XP_013636814.1.26608 XP_013731922.1.73403

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