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Domain assignment for XP_013988442.1.97760 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_013988442.1.97760
Domain Number 1 Region: 1749-1914
Classification Level Classification E-value
Superfamily Tropomyosin 0.000000981
Family Tropomyosin 0.007
Further Details:      
 
Domain Number 2 Region: 1537-1744
Classification Level Classification E-value
Superfamily Tropomyosin 0.0000111
Family Tropomyosin 0.0028
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_013988442.1.97760
Sequence length 2040
Comment PREDICTED: rootletin-like isoform X3 [Salmo salar]; AA=GCF_000233375.1; RF=representative genome; TAX=8030; STAX=8030; NAME=Salmo salar; breed=double haploid; AL=Chromosome; RT=Major
Sequence
MSDTENSNTDSKLESVIQRLEESVLSEEKRLTVRGASPEDPPTCLPARVREIVTKNLNES
PPGAMSSVMSVQEENRVLQVELGRLEDLLAHSRADRDELAIKYSAISERLEQALRLETGD
GERDSPESRSQAQQNMDLRRRLDEEQAAYKRKLTAYQEGQQRQAQLVQKLQAKVLQYKKR
CGDLEQTLVEKSSELEQHRLSGRCDMSNNSHHRDEEDPCGDLENALIRLEEEQQRSSSLS
AVNAMLREQLEQAGLANEALSQDIRRLTADWSKSREELEQRESDWRREEESFHSYFSSEH
SRLLSVWRQVVGFRRQVCELKSATERDLSDMRNELARASHSVQSSCSSLSSTLRSREGGA
TLALEREVVLRGQLELQLRERVAEMMSLQTRTDAERAELNARSERELNTRLSDAVREVER
LKGQSEERDRDVASLTRRLEEQSGNDETDMQVMRAHTETLLDTLRDIAQTVLSDGDSSSE
ADQENTGAPLLALLRVSSPHRSSSPWGSTSPRRYSSLATVPEASLSALRSAVNSRHLQLQ
EVRGRLSSAQSSVQLLRRQLAEAESAKREAEQRSQTLHGERDGVQREKDTTQRERDRLKQ
DRDTLASEKVAVEKAAQAALIKAQILQMDCEKLQQAVTSAQRERDHEREEKVDALQERDR
AKAETDRVQKQWEQSESRASVQRGELSTVRETHHQAEVERQLLKGEKTQLTEALARAESS
NAELSLLVNKLHSEEAALRDSLAKMGSMNEGLAQDKSDLNSIISQLEEEKAHLQAQKHEA
EQEKMTIRDELVRLEQDRLELDSARLALHQSLQESELSRVGMEAELQSLRAERVKLQDKV
TQLCGEVSSLGAELGMARGEEQRQGVALEEVGRGRAELVRERAGLVVQLTASERENATLT
EELASFRSEREALETSLFEVQQQLVQLEFRREQLEAENQSLRLLRETTTAELRRVRADGE
NVLAQSEREREALSQALTTTQQEYQQALHTAITDHQEEAERLTAEKEALRRSLEFEQEGA
LRQVRQEAEEQLLRAERDQEDLKDEVRSLQHDRDQSLLQAETEKQQMLSQKEAEKAVLSE
RVSILQAELGTATLELDRLAREAAHYKEQERATVGALTSELMELRSQLEEAGSVHERELH
RLQENSSDLQTHTDAALKELEECRASLSASEESRDQVRRDMLEMDRRLNQTRDTGEGYRR
DGVELRRTLTDVTKERDTLSLSNAQLRETLRSAETERISVKRQCEEKEQRLAVLEESLSS
AQREVTELRSCLREVERSRLEARRELQELRRQVKVLDGEKEQKGREVAELQTRLSLEEQR
EEERGREIFSLKQKLAEADTARTSIKKELSILQRRLIESESGWRGCERELTAQLQDARGC
EKKLQDEARNLSLRAQTAQDSLTQSSLHLSEAQGRLAATELELARAEAGRRELEFRLGSL
QSALTRTLGIGAGGRRSASGGRGRSPRGSPPAASYSSITRPRSLSPLRCSLSPPKDFGGS
TPDNTLGCSRPISPEQGDTPLPMPLPELDPETLRCGLRDFLQELREAQRDRDEARCQLGT
LQRELEEVTGERDSAQNRLSQLHNTLQECQEGKRGVDGRLSSTQAMLQQQEETVRRGERE
RRALTDRVKELERALQTAETEKKHTQDQLSKQRAGEVRLEAERRRLREALEAAEARGTRV
ELGRRSLEGELQRLKLSLGDREAENQATQERHDALVKQVAEGESCVTSLQRELDRLTQAL
SKAQEGEVCLREKNQSLSQSLQEATVAHSATQGRLVALQKTLGLAEQDRRHLQERVDGAR
ASLTDGKRGMTTLTERVQSLQSELTQSDLRRGELEAELAHTQEALRQRSDSLTEAQRSAQ
SAQTERVSAEERLRGLQRAVAMLETEKKDAERQAVRLEKDKNALRNTLDKVERQKLKTEE
GSMRLSAEKGRLDRSLTTAEQELQDAQRQIALLQAQLAEMEQSHNVSESSVRQRDEVMRE
AERLRVAQREAERTLAARERAHRHRVKGLEEQVSTLKEQLQQEMRRRQPSLPTSLMSGGN
Download sequence
Identical sequences A0A1S3LBV1
XP_013988442.1.97760

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