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Domain assignment for XP_014112740.1.90289 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_014112740.1.90289
Domain Number 1 Region: 2982-3149
Classification Level Classification E-value
Superfamily SPOC domain-like 2.28e-63
Family SPOC domain 0.0000000317
Further Details:      
 
Domain Number 2 Region: 33-187
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 2.38e-31
Family Canonical RBD 0.0025
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_014112740.1.90289
Sequence length 3150
Comment PREDICTED: msx2-interacting protein isoform X4 [Pseudopodoces humilis]; AA=GCF_000331425.1; RF=representative genome; TAX=181119; STAX=181119; NAME=Pseudopodoces humilis; AL=Scaffold; RT=Major
Sequence
MQIEVTAWIGPETESENEFRPLDERIDEFHPKATRTLFIGNLEKTTTYHDLRNIFQRFGG
IVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKMDGEYLGNNRLKLGFGKSMPTNCVWLDG
LSTNVTDQYLTRHFCRYGPVVKVVFDRLKGMALVLYNEIEYAQAAVKETKGRKIGGNKIK
VDFANRESQLAFYHSMEKTGQDIRDFYEMLAERSRDERRGSYEYAPDRTYYETVRTPGTY
PEDPRREYPARGREFYAEWDPYQGDYYDPRYYDDPREYRDYRGDPYEQDIREYSYRQRER
ERERERFESDRDRDHERRPIERSQSPTHSRRPQSPGASPSQSERLQSDSERRIYSRSSDR
SGSCSSLSPPRYDKLDKARVERYAKNEKVEKERVFEQERVDKEKRLVRKEKMEKIEKEKT
DKQKRKAKIHSPSSQSSETDQENEREPSPEKLKGNSKQSKERGDKEGTAKNRLELMPCVV
LTRVKEKEGKVIDQPALEKLRAKLDNDTLKSPLLEQKTQVSQAEPAKSEQSKAEPVRTKV
QKEKALASHIEVVDKEGKMKPKKHLKTEQTSSEGANAVDLDKLEARKRRFADANPKPDRQ
KLDVKRSSQDEEDSRVVLKKQLDATASSREAPVLREGELERKPLRKEMLKRESKKLKLER
LIPVASPKEIQDTLNVGGIGMRPTLDLQARLMEAPEEPVEVQELPPKKPNPVKPQHKQVP
LLDEQGTEREDTKKNYSSLPEETPEHKLGQEKPQSADTEEKISIDIDHTQSYRKQMEQSR
RLKQQLEMEIAKSEKFGSPKKDVDEYEKRSLVHEVGKPPQDVTDDSPPSKRKKTDQFDFE
ISTKRERNYRSSRQVSEDSERMSCSPSIRHFPFHEDDDTLDSPRLMPLKETKESPKIEEK
GLSYSNMTVREDSLKFNPYDSSRREQMAEMAKIKLSVLSSEEDSSRWETQAKQEPGRVDI
SFPSSIVKRDSIRKRSVRDLEPGEVPSDSDDDGENKPHSPKASSLLESSRLSFLLRDREE
KFREREERLQSSSLERNKFYSFALDKTITPDTKALLERAKSLSSSREENWSFLDWDSRFA
SFRNNKDKEKVDSAPRPIPSWYMKKKKIRTDSEGGKLDDKKEDHKEEEQERQELFASRFL
HSSIFEQDSKRLQHLERKDDDLDFISGRLYGRQSSSDGTNSTADLVQEPVVLFHSRFVEL
TRMQQKEKEKDQKPKEMEKQEDKENRPKTPEIVPDSKETEQKPSSVVGPSSVTVLPQEPA
PIAPEKIVSEKVLVEPASVKEEKPEPAAAAEEQKPFPELAAPVKMEPSEQSEPSPVVEVS
KEIVATTLAPEEDAVATEHPSYLDTKPPTPGASFSDADISVDPEPEAAQLLPPQPKLVQK
SDEAVEPKEENPSPSANTDAGVSQKVEVAAEVLPPVSDNDMEVEPPVVVKDKKSYKSKRS
KTPVQSAAANVTEKPVTRKSERIDREKLKRSSSPRGETQKLSELKVEAEKVSRNAAKSPS
SAAEPENVELSLPIGRTRRRNVRSVYATTGDNEGPSPVKDSMEVTRSTRKRVEKEPQETV
TTVPTTPRRGRPPKTRRKPEEDISPIKTEPVQQEVEEAETKDTSEAPKPAEGWRSPRSQK
LTHTHSSAATSQQGKKGKNELKADTTAESEDAAERSGQESSIGDSSNKAKATEKEPAASE
QKRDRKELDVEKNQPEIPTVEIIEKKPVPEKVTKSKRGRYKNTKTVVDKASVCLKNVEIR
LNVDEVKGALRPAEEEAEPVAVSPPKMKSPPKEDILPPHFSKNEVEDSFPEMEKEAMREP
RQSPEAAQLAKQIELEQAVENIAKLTETPPTIAAYKEPTADVAEVRQEEEADKPAHQASE
TELAAAIGSIINDISGETESFPAPPTYPAESEAEIPTEPLVLQSPREEMEPETDQAVNNI
LETEAAVEPVVQPVPGSVPSALETESKESEVSFSESSNSAQEAETLQEAEVARKEKVRQK
TTRQRRKKSTSRKGDATEVNTFEPERVQSKSPPANEVKTKPEEASKEEKHIKPTASTEPS
ASDVTKAVAADVMAAHEAVPESSTSPKVPTPTPLDPGAPPVPLDEGSQSGFKIRSPLENA
PITSPSAPNAALPAISTAVAKLPTPVPTTIVPLHSGAAKVPEWMVRHEEPRARSTPPPAL
PPDTKASDIDTNSSTLRKILMEPKYVSATSITSTHVTTTHAEPVSAPCLEETPLHPAVEA
VKPVSEEKPAVPVTNALDPPVAEAPVFSEKEKINTVIAPKATSVISRMPHSVDLEEAPRI
TLVKQAPQTQTCLVNAPSPKFKQRSSTNDNSRFHPGSMSIIEERPVETGSSPGLRVNTSE
GVVLLSYSGQKTEGPQRISAKISQIPPASAVDIEFQQSVSKSQIKQEPLTPSQPASKGSQ
TSAGYGTVSTHSSLVLGTQPYNTSPVISSVKQERAALDKPDSSHLAVQTTASQPGKVLTQ
TVNTPPVLVHNQMVVNKKLSDPAALKVETKTLQPSNLSPGVSPHHPSLSGKMHSEANHVS
SGPSTPTDRAISHLGVTKQEPHSPRTSGHSPSPFPRACHPGSTSSPALASSTPVMLAPGI
PVPQYISSMHPEQSVIMPPHSVTQTVSLGHLSQGEVRMNTPPLSGIPYGIRPEALHSPRA
ALQPQMEIKPQRSSTPQPAPIRDIVMPPLSSQHPPEEELHFHHTAVCRGPAPVQSDVLVM
QPDYRMHPGGLRLEQYNVPRDVRMIMHPHMATVGEHHSETRQSRTPEGAVKTPPVSKTPQ
PGKETPKSSEGKMAHSPHSEPRLLSVPSGGQLPGLPLTQPVVVPHGVQIMHPAGSSFHDY
RSVYGDMRNYHTAQLGHPQFPGASPIGLPSRSMTPSQGLPEGEHSHPSQPVRSKTPQIPQ
DAKGPSAAGPEQSHHAPVNRHTAQMDPHVHLQRAQGDTSQTSYPSPVAISMKQELPSPHQ
PQAVPKQSMFIPTTSGPPLSRPEPQSTLKQEPSPHPVSQRPVDMVQLLTKYPIVWQGLLA
LKNDTAAVQLHFVSGNNVLAHRSLPAPEGGPPLRIAQRMRLEASQLEGVARRMMVESDYC
LLLALPCGRDQEDVVSQTESLKAAFISYLQAKQAAGIINVPNPGSNQPAYVLQIFPPCEF
SESHLSRLAPDLLASISNISPHLMIVIASV
Download sequence
Identical sequences XP_014112739.1.90289 XP_014112740.1.90289

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