SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for XP_014729046.1.99236 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_014729046.1.99236
Domain Number 1 Region: 500-755
Classification Level Classification E-value
Superfamily YWTD domain 2.62e-55
Family YWTD domain 0.00000493
Further Details:      
 
Domain Number 2 Region: 199-429
Classification Level Classification E-value
Superfamily YWTD domain 3.14e-51
Family YWTD domain 0.00000234
Further Details:      
 
Domain Number 3 Region: 802-1061
Classification Level Classification E-value
Superfamily YWTD domain 8.37e-39
Family YWTD domain 0.0000588
Further Details:      
 
Domain Number 4 Region: 14-148
Classification Level Classification E-value
Superfamily YWTD domain 3.53e-29
Family YWTD domain 0.0000961
Further Details:      
 
Domain Number 5 Region: 1192-1227
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000301
Family LDL receptor-like module 0.0015
Further Details:      
 
Domain Number 6 Region: 1154-1190
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000209
Family LDL receptor-like module 0.0011
Further Details:      
 
Domain Number 7 Region: 758-803
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000339
Family EGF-type module 0.039
Further Details:      
 
Domain Number 8 Region: 1114-1153
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000038
Family LDL receptor-like module 0.00092
Further Details:      
 
Domain Number 9 Region: 455-501
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000385
Family EGF-type module 0.013
Further Details:      
 
Domain Number 10 Region: 153-196
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000195
Family EGF-type module 0.01
Further Details:      
 
Domain Number 11 Region: 1070-1123
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000133
Family EGF-type module 0.012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_014729046.1.99236
Sequence length 1472
Comment PREDICTED: low-density lipoprotein receptor-related protein 5 isoform X2 [Sturnus vulgaris]; AA=GCF_001447265.1; RF=representative genome; TAX=9172; STAX=9172; NAME=Sturnus vulgaris; AL=Scaffold; RT=Major
Sequence
MLLQSTSSIHKASFSGQMYMYWTDWGETPRIERAGMDSSVRKIIVDSDIYWPNGLTIDLD
EQKLYWADAKLSFIHRANLDGSFRQKVVEGSLTHPFALTLSGDTLYWTDWQTRSIHACNK
RTGEKRREILSALYSPMDIQVLSADRQPYFHTPCEDNNGGCSHLCLLSPRDPFYSCACPT
GVQLEDDGRTCKAGAEEVLLLARRTDLRRISLDTPDFTDIILQIDNIRHAIAIDYDPVEG
YIYWTDDDVRAIRRAYLDGTGAQTLVSTEINHPDGIAVDWVARNLYWTDTGTDRIEVTRL
NGTSRKILISENLDEPRAIVLHPVMGYMYWTDWGESPKIECAYLDGSERRVLVNTSLGWP
NGLALDLERNKLYWGDAKTDKIEVINVDGTMRKTLLEDKLPHIFGFTLLGDYIYWTDWQR
RSIERVHKTKASRDIIIDQLPDLMGLKATSVTKVFGTNSCAENNGGCSHLCFFTPQEARC
ACPIGLELLSDMKTCIIPEAFLVFTSRAAIHRISLETNNNDVAIPLTGVKEASALDFDVS
DNRIYWTDVSLKTISRAFMNGSSVEHVIEFGLDYPEGMAVDWMGKNLYWADTGTNRIEVA
RLDGQYRQVLVWKDLDNPRSLALDPTKGYMYWTEWGGKPRIVRAYMDGTNSITLVDKVGR
ANDLTIDYVDQRLYWTDLDTSMIESSNMLGQEREIIADDLPHPFGLTQYSDYIYWTDWNL
HSIERADKTSGKNRTLIQGHLDFVMDILVFHSSRQDGLNDCVQNNGHCGHLCLAIPNGFR
CGCAAHYTLDPNSRNCSSPASFLLFSQKSAISRMIPDDQQSPDIILPMHGLRNVKAIDYD
PLDKLIYWVDGRQNIIKRAKDDGTQPFTVMSTPNQSQSPEKQPHDLSIDIYSHTLYWTCE
ATNSVNVQRLSGESIGMVLRGEHDRPRAIVVNAERGYMYFTNMQERAPKIERAALDGTER
EVLFTTGLIRPVALVVDNKLGKLFWVDADLKRIESCDLSGANRVTLEDSNILQPMGLTVL
GNHLYWIDRQQQMIERVEKVNGYKRTRIQGRIAHLTGIHAVEELDMEEFSVHPCSRDNGG
CSHICIAKGDGTPRCSCPEHLVLLQNLLTCGEPPTCSPDQFTCATGEIDCIPMAWRCDGF
PECDDQSDEDSCPICSAAQFQCEKGQCIDAHLRCNGEIDCQDKSDEADCDTICLPNQFRC
ASGQCILLKQQCDSFPDCIDGSDELMCEKSKPASDESQPHSSAIGPVIGIILSLFVMGGM
YFVCQRVVCQRYAGPNSPFPHEYVSGTPHVPLNFIAPGSSQHGTFTGISCGKSMISSMSL
MGGSSGAPLYDRNHVTGASSSSSSSTKATFYPQILNPPPSPATDRSLYNAEMFYSSNIPS
NTRSYRPYLIRGIAPPTTPCSTDVCDSDYTTSRWKANKYYIDLNSDSDPYPPPPTPRSQY
MSAEESCPPSPATERSYFHLYPPPPSPCTDSS
Download sequence
Identical sequences XP_014729046.1.99236

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]