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Domain assignment for XP_015222239.1.81211 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_015222239.1.81211
Domain Number 1 Region: 18-388
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 1.18e-56
Family L-arabinose binding protein-like 0.0022
Further Details:      
 
Domain Number 2 Region: 394-543,660-798
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like II 2.39e-53
Family Phosphate binding protein-like 0.000000000204
Further Details:      
 
Domain Number 3 Region: 551-655,689-717
Classification Level Classification E-value
Superfamily Voltage-gated potassium channels 0.0000000157
Family Voltage-gated potassium channels 0.012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_015222239.1.81211
Sequence length 949
Comment PREDICTED: glutamate receptor ionotropic, NMDA 1 isoform X5 [Lepisosteus oculatus]; AA=GCF_000242695.1; RF=representative genome; TAX=7918; STAX=7918; NAME=Lepisosteus oculatus; AL=Chromosome; RT=Major
Sequence
MRLFLLAVFFSCSCARGGCEPKMVNIGAVLSQKRYEQVFKDAVTQANQLYGKEKFKMNAI
SVTHKPNAIQMALSVCEDLISSQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAHVWFDMMREFRWNHIILIVSDDHEGRAAQKRLETL
LEEKETKAEKVLQFNQDTNLTALLQEAKELEARVIILSASEEDAAAVYKAARHLNMTGSG
YVWLVGEREMSGKALSEAPDGLIGLQLINGKNESAHINDAVAVVAQSILELFEKENITEP
PRGCVGNTNIWKTGPLFKRVLMSSKYPDGLTGRVEFNDDGDRKFAHYSILNYQKSRLVQV
GIYNGTQVVLNNQRKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTMHDGTCKEE
HTVNGDLIKKVICTGPNETIPGNKTGRPIVPQCCYGFCIDLLIKLAKTMNFTYEVHLVAD
GKFGTQERVNNSNKKEWNGMMGELLSGLADMIVAPLTINNERAQYIEFSKPFKYQGLTIL
VKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDAL
TLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPE
ERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQAV
RDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLAILSSHE
NGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGIVAGIFLIFIEIAYKRHK
DARRKQMQLAFAAVNVWRKNLQDNKEVPGREVLGRAGTPRLPSTSLEKQDDRKSGRAEPD
PKKKASFRSISSTLASSIKRRRSSKDTQYHPTDITGQLNLSDPSVSTVV
Download sequence
Identical sequences XP_015222239.1.81211

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