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Domain assignment for XP_015325546.1.59421 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_015325546.1.59421
Domain Number 1 Region: 102-374
Classification Level Classification E-value
Superfamily L domain-like 2.72e-49
Family Ngr ectodomain-like 0.0042
Further Details:      
 
Domain Number 2 Region: 55-122
Classification Level Classification E-value
Superfamily L domain-like 0.000000544
Family Ngr ectodomain-like 0.0037
Further Details:      
 
Domain Number 3 Region: 444-513
Classification Level Classification E-value
Superfamily Fibronectin type III 0.000000906
Family Fibronectin type III 0.005
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_015325546.1.59421
Sequence length 677
Comment PREDICTED: leucine-rich repeat transmembrane protein FLRT1 [Bos taurus]; AA=GCF_000003205.7; RF=na; TAX=9913; STAX=9913; NAME=Bos taurus; breed=Hereford; AL=Chromosome; RT=Major
Sequence
MVVAHPTAAAATTATPATTVTATVVMTTATMDLRDWLFLCYGLIAFLTEVIDSTTCPSVC
RCDNGFIYCNDRGLTSIPADIPDDATTLYLQNNQINNAGIPQDLKTKVNVQVIYLYENDL
DEFPVNLPRSLRELHLQDNNVRTIARDSLARIPLLEKLHLDDNSVSTVSIEEDAFADSKQ
LKLLFLSRNHLSSIPSGLPRTLEELRLDDNRISTIPLHAFKGLSSLRRLVLDGNLLANQR
IADDTFSRLQNLTELSLVRNSLAAPPLNLPSARLQKLYLQDNAISHVPYNTLAKMRELER
LDLSNNNLTTLPRGLFDDLENLAQLLLRNNPWFCGCNLLWLRDWVKARAAVVNVRGLMCQ
GPEKVRGMAIKDITSEMDECFEAGAQGGAVNAAAKTTHASDHASVTTPQGSLFTLKAKRP
GLRLPDSSLDYPMATGDSAKTLAIHVKPLTADSIRITWKATLPASSFRLSWLRLGHSPAV
GSITETLVQGDKTEYLLTALEPKSTYIICMVTMDTGNTYVADETPVCAKAETADSSGPAT
TLNQEQNADPMAGLPLAGIIGGAVALVFLFLVLGAICWYVHRASELLTRERAYNRGSRKK
DDYLESGTKKDNSILEIRGPGLQMLPINPYRAKEEYVVHTIFPSNGSSLCKGTHTIGYGT
TRGYRDGGIPDIDYSYT
Download sequence
Identical sequences G3MY74
ENSBTAP00000054502 XP_005197393.1.59421 XP_005227270.1.76553 XP_005894195.1.15283 XP_015316787.1.76553 XP_015316788.1.76553 XP_015325545.1.59421 XP_015325546.1.59421 ENSBTAP00000054502

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