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Domain assignment for XP_015456395.1.101067 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_015456395.1.101067
Domain Number 1 Region: 75-312
Classification Level Classification E-value
Superfamily Calponin-homology domain, CH-domain 1.25e-90
Family Calponin-homology domain, CH-domain 0.000000921
Further Details:      
 
Domain Number 2 Region: 2208-2323
Classification Level Classification E-value
Superfamily PH domain-like 6.3e-36
Family Pleckstrin-homology domain (PH domain) 0.0000042
Further Details:      
 
Domain Number 3 Region: 331-452
Classification Level Classification E-value
Superfamily Spectrin repeat 7.72e-36
Family Spectrin repeat 0.0000528
Further Details:      
 
Domain Number 4 Region: 1047-1202
Classification Level Classification E-value
Superfamily Spectrin repeat 7.86e-30
Family Spectrin repeat 0.0000227
Further Details:      
 
Domain Number 5 Region: 1682-1836
Classification Level Classification E-value
Superfamily Spectrin repeat 1.56e-29
Family Spectrin repeat 0.0025
Further Details:      
 
Domain Number 6 Region: 639-778
Classification Level Classification E-value
Superfamily Spectrin repeat 1.32e-28
Family Spectrin repeat 0.00021
Further Details:      
 
Domain Number 7 Region: 1575-1731
Classification Level Classification E-value
Superfamily Spectrin repeat 4.26e-27
Family Spectrin repeat 0.0011
Further Details:      
 
Domain Number 8 Region: 1894-2048
Classification Level Classification E-value
Superfamily Spectrin repeat 7.86e-27
Family Spectrin repeat 0.0017
Further Details:      
 
Domain Number 9 Region: 852-987
Classification Level Classification E-value
Superfamily Spectrin repeat 1.1e-25
Family Spectrin repeat 0.0021
Further Details:      
 
Domain Number 10 Region: 1259-1412
Classification Level Classification E-value
Superfamily Spectrin repeat 2.16e-25
Family Spectrin repeat 0.00058
Further Details:      
 
Domain Number 11 Region: 461-564
Classification Level Classification E-value
Superfamily Spectrin repeat 1.44e-23
Family Spectrin repeat 0.00034
Further Details:      
 
Domain Number 12 Region: 565-673
Classification Level Classification E-value
Superfamily Spectrin repeat 1.15e-20
Family Spectrin repeat 0.00038
Further Details:      
 
Domain Number 13 Region: 1420-1518
Classification Level Classification E-value
Superfamily Spectrin repeat 4.58e-18
Family Spectrin repeat 0.00039
Further Details:      
 
Domain Number 14 Region: 782-884
Classification Level Classification E-value
Superfamily Spectrin repeat 9.6e-18
Family Spectrin repeat 0.00064
Further Details:      
 
Domain Number 15 Region: 2053-2114
Classification Level Classification E-value
Superfamily Spectrin repeat 0.00000000000187
Family Spectrin repeat 0.0018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_015456395.1.101067
Sequence length 2384
Comment PREDICTED: spectrin beta chain, non-erythrocytic 1 isoform X3 [Astyanax mexicanus]; AA=GCF_000372685.1; RF=representative genome; TAX=7994; STAX=7994; NAME=Astyanax mexicanus; AL=Scaffold; RT=Major
Sequence
MTTVAAEFDHMDIQQQYQDTVNNRWDEDWDNENSSARLFERSRIKALAEVHAEVREEQPC
LSGAGFPAQMPFNYNQLDGRFKQLQDEREAVQKKTFTKWVNSHLARVSCRITDLYMDLRD
GRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHR
LTLGLIWTIILRFQIQDISVETEDNKEKRSAKDALLLWCQMKTAGYPNVNIHNFTTSWRD
GMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNLAEQHLGLTKLLDPEDISVDHPDEK
SVITYVVTYYHYFSKMKALKVEGKRIGKVLDNAIETEKMIEKYESLASDLLEWIEQTIII
LNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKGNLEVLLFTIQSKMRANNQKVYMPR
EGKLISDINKAWERLEKAEHERELALRNELIRQEKLEQLARRFDRKAAMRETWLSENQRL
VSQDNFGFDLQAVEAATKKHEAIETDIAAYEERVQAVVSVARELEAENYHDIKRITARKD
NVLRLWEYLLELLKARRQRLEMNLGLQRVFQEMLYIMDWMDEMKMLLLSQDYGKHLLGVE
DLLQKHALVEADIGIQADRVRNVNSNAQKFAIDDDGYKPCDPQVIRDRVAHLEFCYQELT
QLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQILSSDDVGKDLTGAVRLLSQHRALE
DEMSGRAGHLQHTVREGLAMADAGHFGETRIRERVAEVQAQWAALEQLAAVRKARLEEAC
GLHQFQADADDVDAWTLDALRIVSSGDVGHDEFSTQALVKTHKDAAAEVASYRPVIDALH
EQSRALPPELAESADVSGRLAGIEERYKEVAELTRLRKQALQDALALYKMFSEADACEVW
IDEKEQWLNSMEIPEKLEDLEVIQHRFESLEPEMNNQASRVAVVNQIARQLMHSGHPSEK
DIKAQQDKLNTRWSQFRDLVDQKKESLNSALGVQNYHLDCNETKSWIREKTKVIESTQEL
GNDLTGVMALQRKLTGMERDLAAIEAKLGDLKGEAERLAGEHPEQAKAITGRLAEIDSVW
EEMKDTLRNREASLGEASKLQQFLRELDDFQSWLSRTQTAIASEDMPNTLAEAEKLLAQH
EGIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFLRQRLQALDTGWNELHKMWENRQNL
LSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTTLEGAEAAIKKQEDFMTTMDANEEK
INSVVEAGRRLASDGNINTDRIQERAASIDERHKKNREAAVELLMRLKDNRDLQKFLQDC
QELSLWTNEKMLTAQDMSYDEARNLHSKWLKHQAFMAELQSNKEWLDKIEKEGMQLVAEK
PETEAIVKEKLSALQKQWQELESTTQTKAQCLFDANKAELFTQSCADLDKWLGGLEGQIQ
SDDYGKDLTSVNILLKKQQMLENQVEVRKREVEELQSQAHVLRQEGKDTDEVDGRREVVE
KKFQEMLDPLMKRKNFLMASREIHQFNRDVEDEILWVEERMPIATSTDHGHNLQTVQLLI
KKNQTLQKEIQGHQPRCDDIFERSQSILKEDSPSVEAIKARLSDLQTLWDLIIQETEKRH
ERLEEAHKAQQYYFDAAEAEAWMSEQELYMMSEEKAKDEQSSVTMLKKHQILEQAVEDYA
ETVHQLSKTSRGLVAANHPESERIGMRQSQVDKLYAGLKDLSEERRGKLDERFRLFQLNR
EVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQERVDSVNRMADEL
INAGHTDAATVAEWKDGLNEAWADLLELIDTRTQILAASYELHKFYHDAKEILSRILDKH
KMLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQEDAVRLQSAYAGDKADDIQRR
ETEVLDAWRNLLEACEGRRARLLDTGDKFRFFSMVRDLMLWMEDVIRLIEAQEKPRDVSS
VELLMNNHQGIKAEIDARNDSFTACIELGKSLLARKHYASEEIKDKLLQLTDKRKEMIDK
WEDRWEWLRLILEVHQFSRDAGVAEAWLLGQEPYLSSREMGQSVDDVEKLIKRHEAFEKS
AATWEERFSALERLTTMELLEVRRQQEEEERRRKPPTPEPEEIQEQRDGEQIAQNGLPSD
QDSPRDGVDGEIVNGVPERSSKEPSPIPSPTSGRRTKGSQSSTLPAKGQDSPSAQLEGLL
HRKHEWEGHNKKASNRSWHNVYCVINNQEMGFYKDNKNAGQGIPYHNEIPVSLKDAVCEV
AVDYKKKKHVFKLRVTDGNEYLFQAKDDEEMNTWIQAIQNATTGSSASDKSEITPSNQST
PVSSRAQTLPATVTLTTESSPGKREKDKEKDKEKRFSLFSKKKQ
Download sequence
Identical sequences XP_015456395.1.101067

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