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Domain assignment for XP_016011644.1.101085 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_016011644.1.101085
Domain Number 1 Region: 139-385
Classification Level Classification E-value
Superfamily DNA ligase/mRNA capping enzyme, catalytic domain 4.08e-47
Family ATP-dependent DNA ligase catalytic domain 0.0015
Further Details:      
 
Domain Number 2 Region: 392-537
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 1.71e-33
Family DNA ligase/mRNA capping enzyme postcatalytic domain 0.00047
Further Details:      
 
Domain Number 3 Region: 554-681
Classification Level Classification E-value
Superfamily BRCT domain 6.67e-21
Family DNA topoisomerase II binding protein 1, TopBP1 0.037
Further Details:      
 
Domain Number 4 Region: 765-844
Classification Level Classification E-value
Superfamily BRCT domain 0.00000000000611
Family BRCT domain 0.061
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_016011644.1.101085
Sequence length 844
Comment PREDICTED: DNA ligase 4 isoform X2 [Rousettus aegyptiacus]; AA=GCF_001466805.2; RF=representative genome; TAX=9407; STAX=9407; NAME=Rousettus aegyptiacus; AL=Scaffold; RT=Major
Sequence
MRLILPQLERERMAYGIKETMLAKLYIELLNLPREGKDALKLLNYRTPTGTRGDAGDFAM
IAYFVLKPRCLQKGSLSIQQVNDILDSVASNNSAKRKDLIKKSLLQLITQSSALEQKWLI
RMIIKDLRLGFSQQTVFSVFHNDAAELHNVTTDLEKVCRQLHDPSVGLSDISITLFSAFK
PMLAAIADIERIEKDMKNQSFYIETKLDGERMQMHKDGDIYEYFSRNGYKYTEQFGASPQ
EGSLTPFVHNAFKTDIQVCILDGEMMAYNPNTQTFMQKGNKFDIKRMVEDSDLQTCYCVF
DVLMVNNKKLGHETLRKRYEILSSIFTPIPGRIEIVQKTQAHTKKEVIDALNEAIDKREE
GIMVKHPLSIYKPDKRGEGWLKIKPEYVNGLMDELDVIIVGGYWGKGSRGGMMSHFLCAV
TEKPPSGEKPSVFHTLCRVGSGYTMKELYDLGLKLAKYWKPFHKKAPPSSILCGTEKPEV
YIEPCNSVIVQIKATEIVPSDMYKTGCTLRFPRIEKIREDKEWHECMTLDDLEQLRGKAS
GKLASKHCYIGGDDEPREKKRKAAPKLKKVIGIIEHLKAPNLTNINKVSSIFEDVEFCVM
SGIDSYPKPDLENRIAELGGYIVQNPGPDTYCVIAGSENIRVKNIISSNKHDVVKPEWLL
ECFKTKSCVPWQPRFMIHMCPSTKQHFAREYDCYGDSYFVDTDLNQLKEVFSGIKNSSEP
TPKEMASVIADLEYRYSWECSPLSMFRHYTIYVDLYTVINDLSTEIEGTRLAFTALELRF
RGAKVVSFLAEGVSHVIVGEDLNRVVDFKAFRRTLKMKFKILQEGWVTDSIDKCELQEEK
QYLV
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Identical sequences XP_016011644.1.101085

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