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Domain assignment for XP_016952393.1.21709 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_016952393.1.21709
Domain Number 1 Region: 407-667
Classification Level Classification E-value
Superfamily YWTD domain 4.84e-51
Family YWTD domain 0.00000093
Further Details:      
 
Domain Number 2 Region: 318-398,659-714
Classification Level Classification E-value
Superfamily Growth factor receptor domain 7.22e-19
Family Growth factor receptor domain 0.016
Further Details:      
 
Domain Number 3 Region: 28-65
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000000471
Family LDL receptor-like module 0.0007
Further Details:      
 
Domain Number 4 Region: 66-109
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000000432
Family LDL receptor-like module 0.001
Further Details:      
 
Domain Number 5 Region: 230-272
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000055
Family LDL receptor-like module 0.0011
Further Details:      
 
Domain Number 6 Region: 151-187
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000122
Family LDL receptor-like module 0.00074
Further Details:      
 
Domain Number 7 Region: 111-147
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000131
Family LDL receptor-like module 0.00097
Further Details:      
 
Domain Number 8 Region: 193-227
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000406
Family LDL receptor-like module 0.001
Further Details:      
 
Domain Number 9 Region: 280-314
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000759
Family LDL receptor-like module 0.0019
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_016952393.1.21709
Sequence length 859
Comment PREDICTED: low-density lipoprotein receptor isoform X6 [Drosophila biarmipes]; AA=GCF_000233415.1; RF=representative genome; TAX=125945; STAX=125945; NAME=Drosophila biarmipes; AL=Scaffold; RT=Major
Sequence
MGPMRSTPGCFFLLLIIGLVPQEAIRAFESTCSQEQFRCGNGKCIPQRWVCDRENDCADG
SDEAMTQCRSQTCSPEQFACKSGEGECIPLSWMCDQNKDCRDGSDEAQCKRTCRSDEFTC
GNGRCIQSRFRCDDDDDCGDESDEKNCGDKPKCEPESFTCPSGTCIPQLWVCDGEPDCSN
GADEMQNCTASLSLCKSSEFQCSDMITCLDRSWVCDGEADCSDGEDESLANCPQTSCRPD
QFQCDDRTCIAGRLTCNGYHDCSDGSDEKDCQMNSTPRECNSTSEFDCGGGQCIALSKVC
DRRKDCPNGEDEPAGKCGINECSTNNGGCMHQCEDLEVGYRCVCHDGYKLAEDQRTCVDI
DECETPGICSQVCVNEIGAFKCECEEGYMRLLRNHTRCKASEGHASLLLARRHDIRKIAL
DHMEMTSIVNSTKAATALDFVFRTGMIFWSDVTTKSIYKAPIDEGSEKTVVLTKSSVTSD
GLAVDWIYNHVYFTDTNKCTIELTNFEGSMGKVLVQDSLDIPRSIALDPIEGWMYWSDWG
ASPRIERAGMDGSHRTAIITYDVKWPNGITLDLVQKRLYWVDGKLNSISSANYDGSQRRQ
VLYSSEYLKHPFSITTFEDNVYWTDWDKQAVFKANKFNGEEVQAVTATHMVEHPMVVHVY
HPYRQPDGVNHCQSVNGHCSHLCLPAPRINERSPRISCACPTGLKLMPDGLMCVEDPRIP
SVQPTAPSHRPTSQSSNSTTELPQDAHSEAPDRAISAGNGTDSTVRVDKSAEKTEKDYGQ
IALIVIASLTSTALTACVIFVVYRRCTRAVNSMNFENPVYHKTTEDHFSLEKNVTPHMYA
TAMEEESVNPLFEPGTECV
Download sequence
Identical sequences XP_016952392.1.21709 XP_016952393.1.21709 XP_016952394.1.21709 XP_016952395.1.21709

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