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Domain assignment for XP_017941304.1.51550 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_017941304.1.51550
Domain Number 1 Region: 616-871
Classification Level Classification E-value
Superfamily YWTD domain 3.01e-56
Family YWTD domain 0.00000336
Further Details:      
 
Domain Number 2 Region: 5-264
Classification Level Classification E-value
Superfamily YWTD domain 2.75e-54
Family YWTD domain 0.00000163
Further Details:      
 
Domain Number 3 Region: 314-550
Classification Level Classification E-value
Superfamily YWTD domain 1.31e-50
Family YWTD domain 0.00000356
Further Details:      
 
Domain Number 4 Region: 919-1178
Classification Level Classification E-value
Superfamily YWTD domain 7.46e-40
Family YWTD domain 0.00004
Further Details:      
 
Domain Number 5 Region: 873-920
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000335
Family EGF-type module 0.018
Further Details:      
 
Domain Number 6 Region: 1309-1347
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000956
Family LDL receptor-like module 0.0011
Further Details:      
 
Domain Number 7 Region: 1231-1269
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000196
Family LDL receptor-like module 0.001
Further Details:      
 
Domain Number 8 Region: 571-618
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000216
Family EGF-type module 0.0078
Further Details:      
 
Domain Number 9 Region: 1271-1307
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000393
Family LDL receptor-like module 0.0011
Further Details:      
 
Domain Number 10 Region: 267-309
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000269
Family EGF-type module 0.0099
Further Details:      
 
Domain Number 11 Region: 1188-1241
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000685
Family EGF-type module 0.015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_017941304.1.51550
Sequence length 1596
Comment PREDICTED: low-density lipoprotein receptor-related protein 6 isoform X1 [Manacus vitellinus]; AA=GCF_001715985.1; RF=representative genome; TAX=328815; STAX=328815; NAME=Manacus vitellinus; AL=Scaffold; RT=Major
Sequence
MRAAPLLLYANRRDLRLVDAANGKENATVIVGGLEDAAAVDFVFVKGLIYWSDVSEEAIK
RTEFNKSGSVQNVVISGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQE
LDQPRAIALDPGRGFMYWTDWGEVPKIERAGMDGSSRSIIVNTDIYWPNGLTLDYEEQKL
YWADAKLNFIHKSNLDGSHRQAVVKGSLPHPFALTLFGDMLYWTDWNTHSILACSKYSGE
DLREIHSNIFSPMDIHAFSQKRQPNATNPCGINNGGCSHLCLMSPTKPSYQCACPTGVKL
LENGKTCKDGATALLLLARRTDLRRISLDTPDFTDVVLPLEDIRHAIAIDFDPLEGYIYW
TDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTM
RKILISEDLEEPRAIVLDPMAGYMYWTDWGEIPKIERSALDGSDRTVLVNTSLGWPNGLA
LDYAESKMYWGDAKTDKIEVMNTDGTGRRVLVEDKLPHIFGFTLLGDYIYWTDWQRRSIE
RVHKRTAEREIIIDQLPDLMGLKATNVHQIIGTNPCAEDNGGCSHLCLYRPQGLRCACPI
GLELINDMRTCIVPEAFLLFSRRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRI
YWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDG
QHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVGRANGL
TIDYAKRRLYWTDLDTNLIESSNMLGLDREIIADDLPHPFGLTQYQDYIYWTDWSRRSIE
RANKTSGQNRTIIQGHLDYVMDILVFHSSRQAGWNECASSNGHCSHLCLAVPVGGFVCGC
PAHYSLNSDNRTCSAPTTFLLFSQKSAINRMVIDEQQSPDIILPIHSLRNVRAIDYDPLD
KQLYWIDSRQNIIRKAQEDGSQSLTVVTSPVPNQNLDMQPYDLSIDIYSRYIYWTCEATN
VINVTRVDGRPMGVVLKGDQDRPRAIVVNPEKGYMYFTNLQERSPKIERAALDGTEREVL
FFSGLSKPVALAIDSQLGKLFWADSDLRRIESSDLSGANRIVLEDSNILQPVGLTVFENW
LYWIDRQQQMIEKIDMTGREGRTKVQARIAQLSDIHAVKELNIQEYRQHPCSQDNGGCSH
ICIVKGDGTTRCSCPVHLVLLQDELSCGEPPTCSPQQFTCFTGEIDCIPVAWRCDGFTEC
EDHSDEKNCPVCSDTQFQCESGQCIDSALRCNGEANCQDNSDEKNCEVLCLTDQFRCASG
QCIGKSKKCDHNLDCSDSSDEQGCYTTEEPAPQPNNTIGSIIGVILTVFVVGAMYFICQR
VLCPRMKGDGETMTNDYVVHGPASVPLGYVPHPSSLSGSLPGMSRGKSVISSLSIMGGSS
GPPYDRAHVTGASSSSSSSTKGTYFPPILNPPPSPATERSHYTMEFGYSSNSPSTHRSYS
YRPYSYRHFAPPTTPCSTDVCDSDYAPSRRVTAATGKGYTSDLNYDSEPVPPPPTPRSQY
LSAEENYESCPPSPYTERSYSHHLYPPPPSPCTDSS
Download sequence
Identical sequences XP_017941304.1.51550

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