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Domain assignment for XP_019371508.1.87953 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_019371508.1.87953
Domain Number 1 Region: 633-888
Classification Level Classification E-value
Superfamily YWTD domain 1.83e-56
Family YWTD domain 0.00000331
Further Details:      
 
Domain Number 2 Region: 22-281
Classification Level Classification E-value
Superfamily YWTD domain 2.75e-55
Family YWTD domain 0.00000163
Further Details:      
 
Domain Number 3 Region: 332-567
Classification Level Classification E-value
Superfamily YWTD domain 7.46e-49
Family YWTD domain 0.00000356
Further Details:      
 
Domain Number 4 Region: 936-1194
Classification Level Classification E-value
Superfamily YWTD domain 3.01e-40
Family YWTD domain 0.000038
Further Details:      
 
Domain Number 5 Region: 890-938
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000317
Family EGF-type module 0.018
Further Details:      
 
Domain Number 6 Region: 1247-1287
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000209
Family LDL receptor-like module 0.001
Further Details:      
 
Domain Number 7 Region: 588-635
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000389
Family EGF-type module 0.0063
Further Details:      
 
Domain Number 8 Region: 1326-1364
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000144
Family LDL receptor-like module 0.0014
Further Details:      
 
Domain Number 9 Region: 284-326
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000289
Family EGF-type module 0.0097
Further Details:      
 
Domain Number 10 Region: 1288-1324
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000143
Family LDL receptor-like module 0.0011
Further Details:      
 
Domain Number 11 Region: 1205-1258
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000453
Family EGF-type module 0.015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_019371508.1.87953
Sequence length 1613
Comment PREDICTED: low-density lipoprotein receptor-related protein 6 [Gavialis gangeticus]; AA=GCF_001723915.1; RF=representative genome; TAX=94835; STAX=94835; NAME=Gavialis gangeticus; AL=Scaffold; RT=Major
Sequence
MGPAPRILLLLAALCALARAAPLLLYANRRDLRLVDAANGKENATVVVGGLEDAAAVDFV
FVQGLIYWSDVSEEAIKRTEFNKTGSVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRI
EVSNLDGSLRKVLFWQELDQPRAIALDPARGFMYWTDWGEVPKIERAGMDGSSRSVIINT
DIYWPNGLTLDYEERKLYWADAKLNFIHKSNLDGSHRQAVVKGSLPHPFALTLFGDMLYW
TDWNTHSILACNKYSGEHLHEVHSNIFSPMDIHAFNQQRQPNATNPCGTNNGGCSHLCLM
SPTKSSYQCACPTGVQLLENGKTCKDGATELLLLARRTDLRRISLDTPDFTDIVLQLEDI
RHAIAIDYDPVEGYIYWTDDEVRAIRRSFVDGSGCQFVVTAQIAHPDGIAVDWVARNLYW
TDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGS
DRIVLVNTSLGWPNGLALDYAESKIYWGDAKTDKIEVMNSDGTGRRVLVEDKLPHIFGFT
LLGDYVYWTDWQRRSIERVHKRTAEREIIIDQLPDLMGLKATNVHQIIGTNPCADDNGGC
SHLCLYRPQGLRCACPIGLELISDMKTCIVPEAFLLFSRRADIRRISLETNNNNVAIPLT
GVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNL
YWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMD
GSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLDREVIADDLPHPFGLT
QYQDYIYWTDWSRRSIERANKTSGQNRTIIQGHLDYVMDILVFHSSRQAGWNECASSNGH
CSHLCLAVPIGGFVCGCPAHYSLNFDNRTCSAPTTFLLFSQKNAINRMVIDEQQSPDIIL
PIHSLRNVRAIDYDPLDKQLYWIDSRQNVIRKSQEDGSQSLTVVASPVPNQNLDMQPYDL
SIDIYSRYIYWTCEATNVINVTRLDGRSMGVVLKGDQDRPRAIVVNPEKGYMYFTNLQER
SPKIERAALDGTEREVLFFSGLSKPVALAIDSQLGKLFWADSDLRRIESSDLSGANRIVL
EDSNILQPVGLTVFENWLYWIDRQQQMIEKIDMTGQGGRTKVQARIAQLSDIHAVKELNI
QEYRQHPCSQDNGGCSHICIVKGDGTTRCSCPVHLVLLQDELSCGEPPTCSPQQFTCFTG
EIDCIPVAWRCDGFTECEDHSDEKNCPVCSDSQFQCESGQCVESSLQCNGEANCQDNSDE
KNCEVLCLTDQFRCASGQCIGKNKKCDHNLDCSDNSDKHGCYTTEEPAPQPNNTIGSIIG
VILTVFVVGAMYFICQRVLCPRMKGDGETMTNDYVVHGPASVPLGYVPHPSSLSGSLPGM
SRGKSVISSLSIMGGSSGPPYDRAHVTGASSSSSSSTKGTYFPPILNPPPSPATERSHYT
MEFGYSSNSPSTHRSYSYRPYSYRHFAPPTTPCSTDVCDSDYAPSRRITTAVAKGYTSDL
NYDSEPVPPPPTPRSQYLSAEENYESCPPSPYTERSYSHHLYPPPPSPCTDSS
Download sequence
Identical sequences XP_019371508.1.87953

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