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Domain assignment for XP_019674029.1.62641 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_019674029.1.62641
Domain Number 1 Region: 111-199
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 5.49e-37
Family SCAN domain 0.0000462
Further Details:      
 
Domain Number 2 Region: 498-555
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 8.79e-24
Family Classic zinc finger, C2H2 0.0048
Further Details:      
 
Domain Number 3 Region: 442-499
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.4e-22
Family Classic zinc finger, C2H2 0.0032
Further Details:      
 
Domain Number 4 Region: 236-291
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 1.57e-19
Family KRAB domain (Kruppel-associated box) 0.0014
Further Details:      
 
Domain Number 5 Region: 393-443
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000257
Family Classic zinc finger, C2H2 0.018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_019674029.1.62641
Sequence length 580
Comment PREDICTED: neurotrophin receptor-interacting factor homolog isoform X4 [Felis catus]; AA=GCF_000181335.2; RF=representative genome; TAX=9685; STAX=9685; NAME=Felis catus; breed=Abyssinian; AL=Chromosome; RT=Major
Sequence
MLENYRNLVSVEHQLSKPDVVSQLEEEEALWSVERGIPQDTFSECPAAQLDPQVDPLPAG
NPLMKIEVVEVLTLNQEVARPRNAQIRALYAEDEGLSPEVLGEPTQQLGKHPADPEAARQ
RFRGFCFEEVAGPREALARLRELCRQWLQPEAHSKEQMLELLVLEQFLGALPRKLQRWVQ
SQHPEDCQEAVALVEDVTWISEEEALPAQDPTCSLETTAPEEEKEENMTTWPAKAPPEEP
VTFLDVAVDFSKEEWGLLDPMQRTEYHDVMLETFGHLVSVGWETTLESKELTPKSDIPEE
EPAPDLKMEEFSRDDTWSSTSRDILQGGTQEVLDTALKQVELTQEETLPQKSPQSQANTG
LVTSPISLQKTLPRKRLRKRGSRVKKVTRGPCVKIHQKGHKGEKARENSGCGRAFSRSTQ
QITFTRIHKGSQVCRCSECGKTFRNPRYFSVHKKIHTGEKPYVCQDCGKAFVQSSSLTQH
QRVHTGERPFECHECGRTFNDRSAISQHLRTHTGAKPYQCQDCGKAFRQSSHLIRHQRTH
TGERPYMCSKCGKAFTQSSHLIGHQKTHSGVKCKKKQPTS
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Identical sequences XP_019674028.1.62641 XP_019674029.1.62641

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