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Domain assignment for XP_019810422.1.53367 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_019810422.1.53367
Domain Number 1 Region: 481-736
Classification Level Classification E-value
Superfamily YWTD domain 7.72e-56
Family YWTD domain 0.00000555
Further Details:      
 
Domain Number 2 Region: 180-410
Classification Level Classification E-value
Superfamily YWTD domain 8.37e-51
Family YWTD domain 0.00000251
Further Details:      
 
Domain Number 3 Region: 783-1042
Classification Level Classification E-value
Superfamily YWTD domain 1.28e-38
Family YWTD domain 0.0000709
Further Details:      
 
Domain Number 4 Region: 1-129
Classification Level Classification E-value
Superfamily YWTD domain 7.59e-28
Family YWTD domain 0.0000845
Further Details:      
 
Domain Number 5 Region: 1171-1211
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000034
Family LDL receptor-like module 0.0016
Further Details:      
 
Domain Number 6 Region: 1133-1168
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000223
Family LDL receptor-like module 0.0012
Further Details:      
 
Domain Number 7 Region: 1092-1132
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000471
Family LDL receptor-like module 0.00086
Further Details:      
 
Domain Number 8 Region: 739-790
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000123
Family EGF-type module 0.022
Further Details:      
 
Domain Number 9 Region: 436-482
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000485
Family EGF-type module 0.0093
Further Details:      
 
Domain Number 10 Region: 135-177
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000205
Family EGF-type module 0.013
Further Details:      
 
Domain Number 11 Region: 1050-1102
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000838
Family EGF-type module 0.013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_019810422.1.53367
Sequence length 1451
Comment PREDICTED: low-density lipoprotein receptor-related protein 5 isoform X2 [Bos indicus]; AA=GCF_000247795.1; RF=representative genome; TAX=9915; STAX=9915; NAME=Bos indicus; breed=Nelore; AL=Chromosome; RT=Major
Sequence
MYWTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANL
DGSFRQKVVEGSLTHPFALTLSGDTLYWTDWQTRSIHACNKRTGDKRKEILSALYSPMDI
QVLSPERQPYYHTRCEEDNGGCSHLCLLSPREPFYACACPTGVQLQDNGQTCKAGAEEVL
LLARRTDLRRISLDTPDFTDIVLQVDDIRHAIAIDYDPLEGYVYWTDDEVRAIRRAYLDG
SGAQTLVNTEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPRAI
VLHPVMGLMYWTDWGENPKIECANLDGQERHILVNTSLGWPNGLALDLQEGKLYWGDAKT
DKIEVINVDGTKRRTLLEDKLPHIFGFTLLGDFIYWTDWQRRSIERVHKVKASRDVIIDQ
LPDLMGLKAANVAKVVGTNPCADRNGGCSHLCFFTPRATKCGCPIGLELLSDMKTCIVPE
AFLVFTSRAAIHRISLDTTNNDVAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFM
NGSSVEHVIEFGLDYPEGMAVDWMGKNLYWADTGTNRIEVARLDGQFRQVLVWRDLDNPR
SLALDPTKGYIYWTEWGGKPRIVRAFMDGTNCMTLVDKVGRANDLTIDYADQRLYWTDLD
TNMIESSNMLGQERVVIADDLPHPFGLTQYSDYIYWTDWNLHSIERADKTSGRNRTLIQG
HLDFVMDILVFHSSRQDGLNDCMHNNGQCGQLCLAVPSXXRCSCASHYTLDPSSRNCSPP
TTFLLFSQKCAISRMIPDDQRSPDLILPLHGLRNVKAIDYDPLDKFIYWVDGRQNIKRAK
DDGTQPFVLTSPSQSQNPDRQPHDLSIDIYSRTLFWTCEATNTINVHRLNGDAMGVVLRG
DRDKPRAIVVNAERGYLYFTNMQDRAAKIERAALDGTEREVLFTTGLIRPVALXVDNTLG
KLFWVDADLKRIESCDLSGANRLTLEDANIVQPVGLTVLGKHLYWIDRQQQMIERVDKTT
GDARTRVQGRVAHLTGIHAVEDISLEEFSAHPCARDNGGCSHICVAKGDGTPRCSCPVHL
VLLQNLLTCGEPPTCSPDQFACATGEIDCIPGAWRCDGFPECDDQSDEEGCPVCSASQFP
CARGQCVDLRLRCDGEADCQDRSDEADCDAVCLPNQFRCASGQCVLIKQQCDSFPDCVDG
SDELMCEITKLPSDDGPAHSSAIGPVIGIILSLFIMGGVYFVCQRVVCQRYAGANGPFPH
EYVSGTPHVPLNFIAPGGSQHGPFTGISCGKSMMSSVSLMGGRAGVPLYDRNHVTGASSS
SSSSTKATLYPPILNPPPSPATDPSLYNVDVFYSSNIPAAARPYRPYIIRGVAPPTTPCS
TDVCDSDYSASRWKASKYYLDLNSDSDPYPPPPTPHSQYLSAEDSCPPSPATERSYFHLF
PPPPSPCTDSS
Download sequence
Identical sequences XP_019810422.1.53367

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