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Domain assignment for XP_020412230.1.23749 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_020412230.1.23749
Domain Number 1 Region: 116-256
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 1.19e-40
Family B3 DNA binding domain 0.0029
Further Details:      
 
Domain Number 2 Region: 580-661
Classification Level Classification E-value
Superfamily CAD & PB1 domains 0.0000000000589
Family PB1 domain 0.032
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_020412230.1.23749
Sequence length 698
Comment auxin response factor 18 [Prunus persica]; AA=GCF_000346465.2; RF=representative genome; TAX=3760; STAX=3760; NAME=Prunus persica; cultivar=Lovell; AL=Chromosome; RT=Major
Sequence
MAHLECDSSISRAETGFGGGDLYTELWKLCAGPLVDVPRPGERVFYFPQGHMEQLEASTN
QELNQQIPLFNLPSKILCRVVHIHLLAEQETDEVYAQITLHPEADQSEPTSPDPCIPEPS
KPTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMIQATPTQELNAKDLHGYEWKFK
HIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGDNGELRVGVRRLARQQSHMPSSVI
SSQSMHLGVLATASHALMTRTLFVVYYKPRTSQFIIGLNKYLEAINNKFSVGMRFKMRFE
GEESPERRFTGTIVGVGDLSSQWSESKWRSLKIQWDEHAAVQRPERVSFWEIEPFVASAP
IHLVQPVVKSKRPRPVEISSSEITTNSPASAFWYHGSTQTVELNQLGGVPEVQSSGSQVV
WPLRQKESNSSSYSSSRVYSEGIWPSSPHVNVSLSLFPDSKEGNKNVTTGSVLSSVASPV
SSKASSKPSNTPIPGQVGKEKKSDSSDLWLFGYNLTNNSKTASPPESEPVCKAMSCGGKG
PTTAAAFEVYQDLDVSKLSKEQKQVISEASPGETQGKQGLTLSTRTRTKVQMQGVAVGRA
VDLTSLKGYDNLIDELEKMFEIKGELRPQNKWAVVFTDDENDMMLMGDDQWLDFCKLVKK
IFIYSSDEVQKMNRCKLQNSSLDCEGTVSVDSEHRCET
Download sequence
Identical sequences M5XS24
ppa002230m|PACid:17646101 XP_020412230.1.23749

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