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Domain assignment for XP_020460984.1.23826 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_020460984.1.23826
Domain Number 1 Region: 125-369
Classification Level Classification E-value
Superfamily vWA-like 1.45e-78
Family Integrin A (or I) domain 0.0000000877
Further Details:      
 
Domain Number 2 Region: 368-454
Classification Level Classification E-value
Superfamily Integrin domains 1.26e-20
Family Integrin domains 0.0004
Further Details:      
 
Domain Number 3 Region: 19-74
Classification Level Classification E-value
Superfamily Plexin repeat 0.0000000000162
Family Plexin repeat 0.0014
Further Details:      
 
Domain Number 4 Region: 618-698
Classification Level Classification E-value
Superfamily Integrin beta tail domain 0.00000000157
Family Integrin beta tail domain 0.0029
Further Details:      
 
Domain Number 5 Region: 576-616
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000558
Family Integrin beta EGF-like domains 0.0016
Further Details:      
 
Domain Number 6 Region: 534-572
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000586
Family Integrin beta EGF-like domains 0.0091
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_020460984.1.23826
Sequence length 781
Comment integrin beta-6 [Monopterus albus]; AA=GCF_001952655.1; RF=representative genome; TAX=43700; STAX=43700; NAME=Monopterus albus; AL=Scaffold; RT=Major
Sequence
MGLILLSLIFRYWINTVEGSCSAGTAVTCDQCLQLSPHCAWCTQENFTDWFSINERCDTL
DGLLDKGCARDQVEFTVSKAQILQDLPLGKKTGNANSTQISPQKMALRLRPGSQVSFQVK
IQHTEDYPVDIYYLMDLSASMIDDLEMIKDLGSTLSKEMANLTSKFRMGFGSFVEKPVLP
FIMITEEELANPCSGVGANCLPTFGYKHVLSLTSSTDKFNEIIAMQRVSANIDIPECGFD
AVMQAAVCGDKIGWRNDSMRLLVFVSDADSHIGMDSKMAGIVIPNDGQCHLDVNNEYSMS
TVQEYPTLGQLVDKLVENNILLIFAVTEKQKQNYKNYANLIPGATVGVLATDSRNILELI
VTAYKELRSEIELEVLGDTEELQMYFTARCPNGSVLPDQRHCSDIKPGETVVFNVSVVVP
GCLSGVRHFSLKPMGLQDSLEVELESVCSCDCRQPPEANSSRCTEGQGTFQCGVCMCQPG
FQGAQCECNEESTLLSNCLANNESEICSSQGECYCGQCKCHASSFGRIYGPYCECNNYSC
VRFRGELCGGHGVCDCGDCHCQSGWTGEYCNCSTSTEACMSEDGTLCSNRGKCECGHCVC
SAPGASGDKCEKCPTCGDACSSARTCVECHLQDQDDAELCDQRCSNSKIFINTTGDYAKS
PSMHCTLMMTNDCWISFNVVGVEMGTTAYDLQYDCPEPPNIPMIILGVSLSVVCIGLILL
GVWKVLVSVHDRKEVAKFEAEKAKAKWQTGTNPLFRSSTTTFKNVTYKNPQSKNIIVMDH
Y
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Identical sequences XP_020460984.1.23826 XP_020460993.1.23826

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