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Domain assignment for XP_020761108.1.74333 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_020761108.1.74333
Domain Number 1 Region: 100-395
Classification Level Classification E-value
Superfamily L domain-like 5.95e-61
Family Internalin LRR domain 0.024
Further Details:      
 
Domain Number 2 Region: 355-558
Classification Level Classification E-value
Superfamily L domain-like 2.72e-42
Family Internalin LRR domain 0.048
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_020761108.1.74333
Sequence length 582
Comment leucine-rich repeat protein SHOC-2 [Odocoileus virginianus texanus]; AA=GCF_002102435.1; RF=representative genome; TAX=9880; STAX=9874; NAME=Odocoileus virginianus texanus; AL=Scaffold; RT=Major
Sequence
MSSSLGKEKDSKEKDPKAPSAKEREKEAKASGGFGKESKEKEPKTKGKDAKDGKKDSSAA
QPGVAFSVDNTIKRPNPAPGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHILPSSIK
ELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNK
LREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNL
ITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIP
RSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSL
NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED
VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN
NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC
SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
Download sequence
Identical sequences A6QLV3 L8ILV1 W5PLK6
ENSTTRP00000006602 NP_001095413.1.59421 NP_001095413.1.76553 XP_004020244.1.66739 XP_004265894.1.21590 XP_005225784.1.76553 XP_005698523.1.57651 XP_005698524.1.57651 XP_005894817.1.15283 XP_005983251.1.78601 XP_006043988.1.26621 XP_006043989.1.26621 XP_007173138.1.59432 XP_007469693.1.90284 XP_010818331.1.76553 XP_010857663.1.44457 XP_010857664.1.44457 XP_010857665.1.44457 XP_010857666.1.44457 XP_011958305.1.66739 XP_011958306.1.66739 XP_011958307.1.66739 XP_011983786.1.54773 XP_011983787.1.54773 XP_011983788.1.54773 XP_011983790.1.54773 XP_011983791.1.54773 XP_014958900.1.66739 XP_017896764.1.57651 XP_017896765.1.57651 XP_019795537.1.83887 XP_019795538.1.83887 XP_019795540.1.83887 XP_019795541.1.83887 XP_019795542.1.83887 XP_020761108.1.74333 XP_020761109.1.74333 XP_020761110.1.74333 XP_020761112.1.74333 XP_020761113.1.74333 ENSTTRP00000006602 ENSBTAP00000010138 ENSBTAP00000010138 ENSOARP00000011329

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