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Domain assignment for XP_021238609.1.32913 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_021238609.1.32913
Domain Number 1 Region: 442-697
Classification Level Classification E-value
Superfamily YWTD domain 9.94e-57
Family YWTD domain 0.00000336
Further Details:      
 
Domain Number 2 Region: 141-376
Classification Level Classification E-value
Superfamily YWTD domain 4.71e-49
Family YWTD domain 0.00000418
Further Details:      
 
Domain Number 3 Region: 745-1004
Classification Level Classification E-value
Superfamily YWTD domain 2.75e-40
Family YWTD domain 0.0000386
Further Details:      
 
Domain Number 4 Region: 699-747
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000209
Family EGF-type module 0.018
Further Details:      
 
Domain Number 5 Region: 1135-1173
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000524
Family LDL receptor-like module 0.0013
Further Details:      
 
Domain Number 6 Region: 1056-1096
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000131
Family LDL receptor-like module 0.001
Further Details:      
 
Domain Number 7 Region: 397-444
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000002
Family EGF-type module 0.0086
Further Details:      
 
Domain Number 8 Region: 1097-1133
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000694
Family LDL receptor-like module 0.0012
Further Details:      
 
Domain Number 9 Region: 21-90
Classification Level Classification E-value
Superfamily YWTD domain 0.0000000222
Family YWTD domain 0.0017
Further Details:      
 
Domain Number 10 Region: 93-135
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000067
Family EGF-type module 0.0099
Further Details:      
 
Domain Number 11 Region: 1014-1067
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000875
Family EGF-type module 0.015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_021238609.1.32913
Sequence length 1444
Comment low-density lipoprotein receptor-related protein 6 isoform X3 [Numida meleagris]; AA=GCF_002078875.1; RF=representative genome; TAX=8996; STAX=8996; NAME=Numida meleagris; breed=g44 Domestic line; AL=Chromosome; RT=Major
Sequence
MYQRRPFICMDAWLLVCRALDSGRTKQAVVKGSLPHPFALTLFGDTLYWTDWNTHSILAC
SKYSGEDLREIHSNIFSPMDIHAFNQKRQPNATNPCGINNGGCSHLCLMSPTKPSYQCAC
PTGVKLLENGKTCNDGATELLLLARRTDLRRISLDTPDFTDIVLPLEDIRHAIAIDFDPL
EGYIYWTDDEVRAIRRSFVNGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVT
RLNGTLRKILISEDLEEPRAIVLDPTVGYMYWTDWGEIPKIERAALDGSDRIVLVNTSLG
WPNGLALDYAESKIYWGDAKTDKIEVMNADGTGRRVLVEDKLPHIFGFTLLGNYVYWTDW
QRRSIERVHKRTAEREIIIDQLPDLMGLKATNVRQIIGTNPCAEDNGGCSHLCLYRPQGL
RCACPIGLELINDMKTCIVPEAFLLFSRRADIRRISLETNNNNVAIPLTGVKEASALDFD
VTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIE
VSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRASMDGSERTTLVPNV
GRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLDREIIADDLPHPFGLTQYQDYIYWTDW
SRRSIERANKTSGQNRTIIQGHLDYVMDILVFHSSRQAGWNECASSNGHCSHLCLAVPVG
GFVCGCPAHYSLNSDNRTCSAPTTFLLFSQKNAINRMVIDEQQSPDIILPIHSLRNVRAI
DYDPLDKQLYWIDSRQNIIRKAQEDGSQSLTVVTSPVPSQNLDMQPYDLSIDIYSRYIYW
TCEATNVINVTRLDGRPMGVVLKGSQDRPRAIVVNPEKGYMYFTNLQERSPKIERAALDG
TEREVLFFSGLSKPVALAIDSQLGKLFWADSDLRRIESSDLSGANRVVLEDSNILQPVGL
TVFENWLYWIDRQQQMIEKIDMTGREGRTKVQARIAQLSDIHAVKELNVQEYRQHPCSQD
NGGCSHICIVKGDGTTRCSCPVHLVLLQDELSCGEPPTCSPQQFTCYTGEIDCIPVAWRC
DGFTECEDHSDEKNCPVCSDTQFQCESGQCIDSALQCNGEANCQDNSDEKNCEVLCLTNQ
FRCASGQCIGKSKKCDHNLDCSDSSDEQGCYTTEEPAPQPNNTIGSIIGVILTLFVVGAM
YFICQRVLCPRMKGDGETMTNDYVVHGPASVPLGYVPHPSSLSGSLPGMSRGKSVISSLS
IMGGSSGPPYDRAHVTGASSSSSSSTKGTYFPPILNPPPSPATERSHYTMEFGYSSNSPS
THRSYRCITQNAQSLYMLTLSQKSPYHSYRPYSYRHFAPPTTPCSTDVCDSDYAPSRRVT
ATMAKGYTSDLNYDSEPVPPPPTPRSQYLSAEENYESCPPSPYTERSYSHHLYPPPPSPC
TDSS
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Identical sequences XP_021238609.1.32913

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