SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for XP_021557010.1.83697 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_021557010.1.83697
Domain Number 1 Region: 29-279
Classification Level Classification E-value
Superfamily Calponin-homology domain, CH-domain 5.85e-92
Family Calponin-homology domain, CH-domain 0.00000311
Further Details:      
 
Domain Number 2 Region: 2170-2289
Classification Level Classification E-value
Superfamily PH domain-like 1.04e-33
Family Pleckstrin-homology domain (PH domain) 0.0000189
Further Details:      
 
Domain Number 3 Region: 295-416
Classification Level Classification E-value
Superfamily Spectrin repeat 5.89e-33
Family Spectrin repeat 0.0000813
Further Details:      
 
Domain Number 4 Region: 601-741
Classification Level Classification E-value
Superfamily Spectrin repeat 2.4e-29
Family Spectrin repeat 0.00026
Further Details:      
 
Domain Number 5 Region: 1640-1793
Classification Level Classification E-value
Superfamily Spectrin repeat 5.4e-29
Family Spectrin repeat 0.0012
Further Details:      
 
Domain Number 6 Region: 1009-1164
Classification Level Classification E-value
Superfamily Spectrin repeat 2.82e-27
Family Spectrin repeat 0.00000475
Further Details:      
 
Domain Number 7 Region: 1851-2005
Classification Level Classification E-value
Superfamily Spectrin repeat 3.47e-27
Family Spectrin repeat 0.0019
Further Details:      
 
Domain Number 8 Region: 1532-1683
Classification Level Classification E-value
Superfamily Spectrin repeat 5.17e-26
Family Spectrin repeat 0.0029
Further Details:      
 
Domain Number 9 Region: 1228-1375
Classification Level Classification E-value
Superfamily Spectrin repeat 1.15e-25
Family Spectrin repeat 0.00055
Further Details:      
 
Domain Number 10 Region: 815-949
Classification Level Classification E-value
Superfamily Spectrin repeat 2.88e-25
Family Spectrin repeat 0.0035
Further Details:      
 
Domain Number 11 Region: 425-526
Classification Level Classification E-value
Superfamily Spectrin repeat 2.49e-22
Family Spectrin repeat 0.00034
Further Details:      
 
Domain Number 12 Region: 745-849
Classification Level Classification E-value
Superfamily Spectrin repeat 8.16e-20
Family Spectrin repeat 0.0015
Further Details:      
 
Domain Number 13 Region: 529-636
Classification Level Classification E-value
Superfamily Spectrin repeat 6.81e-19
Family Spectrin repeat 0.00059
Further Details:      
 
Domain Number 14 Region: 1350-1447
Classification Level Classification E-value
Superfamily Spectrin repeat 0.000000000000157
Family Spectrin repeat 0.0021
Further Details:      
 
Domain Number 15 Region: 2011-2070
Classification Level Classification E-value
Superfamily Spectrin repeat 0.0000000000648
Family Spectrin repeat 0.0017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_021557010.1.83697
Sequence length 2326
Comment LOW QUALITY PROTEIN: spectrin beta chain, erythrocytic [Neomonachus schauinslandi]; AA=GCF_002201575.1; RF=representative genome; TAX=29088; STAX=29088; NAME=Neomonachus schauinslandi; AL=Scaffold; RT=Major
Sequence
MTSATEFENVGNQPPYSRISARWAAPDDELDNDNSSARLFERSRIKALADEREVVQKKTF
TKWVNSNLARVPCRITDLYKDLRDGRMLIKLLEVLSGEMLPKPTKGKMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLVLGLIWTIILRFQIQDIVVQTQEGRETRSAKDALL
LWCQMKTAGYPQVNVTNFTSSWKDGLAFNALIHKHRPDLIDFDKLKDSNARHNLEHAFKV
AERQLGIIPLLDPEDVFTENPDEKSIITYVVAFYHYFSKMKVLAVEGKRVGKVIDHAIET
EKMIEKYSGLASELLTWIEQTVAVLNSRRFANSLAGVQQQLQAFSTYRTVEKPPKFQEKG
NLEVLLFTIQSRMRANNQKVYTPHDGKLVSDINRAWESLEEAEYQRELALRNELIRQEKL
EQVARRFDRKAAMRETWLNENQRLVAQDNFGFDLAAVEAAKKKHEAIETDTAAYEERVKA
LEDLAQELEQENYHDQKRITARKDNILRLWSYLQELLRSRRQRLEMTLALQKLFQDMLHS
IDWMDEIKAHLLSAEFGKHLLEVEDLLQKHKLMEADIAIQGDKVKTITAATLQFTEEKGY
QPCDPQVIQDRVSHLEQCFEELSNMAAGRKAQLEQSKRLWKFFWEMDEAESWIKEKEQIY
SSLDYGKDLTSVLILQRKHKAFEDELRGLDTHLEQIFQEAEGMVARKQFGHPQIEARIKE
VSAQWDQLKELAAFRKKNLQDAENFFQFQGDADDLKAWLQDAHRLLSGEDVGQDEGATRA
LGKKHKDFLAELEESRGVMEHLEQQAQGFPQEFRDSPDVTNRLQALRELYQQVVAQADLR
RQRLQDALDLYTVFGETDACELWMGEKEKWLAQMEIPDTLEDLEVAQHRFDILDQEMKTL
MTQIDGVNLAANSLVDSGHPRSGEVKQYQDHLNDRWQAFQTIVSDRREAVNAALRVRNYC
VDCEETSKWIEDKMQVVQATKELGQDLAGIIAIQRKLSGLERDVAAIRDRVGALERESQQ
LMASHPEQGEDIGQRQACVEKLWQELQEALLEQEASLGEASQLQAFLQNMDDFQAWLSMA
QKAVASEDMPESLPEAEQLLQQHVAIKDDIDRHQEIFQNVKVSGENVIRDQTDPEYLLLG
QRLEGLDAGWDALCRMWESRNHSLAQCLGFREFQRDAKQAEAILSNQEYTLAHLEPPDSL
EAAEVGIRKFEDFLVSMENNQDKVLSPVDSGNKLIAEENLYSDKILEKVQLIKDRHRKNK
EKAEETSVILKDNLELQHFLQNCQELTLWINDKLLTSQDVSYDDARNLQNKWAKHQAFMA
DLASHQGWLDSIDAEGKQLMEEKTQYRALVSQRLEDLHRLWDELQATTQERAQHLSAARS
SYLRSQTHADLNKWISAMEDQLRSDDPGKDLTSVNRMLAKLKRVEDQVNVRKEELGELLA
QVPSLGEEAGDTDMSIERRFLDLLEPLERRKKQLESSRAKLQISRDLEDETLWVEERLPL
AQSADYGTNLQTVQLLMKKNQTLQNEILGHAPRVEDVLQRGQRLVEAAAIDCGDMEERLG
HLQGSWDALREAAAGRLQRLQDTSEAQQYYLDAGEAEAWISEQELYIISDETPKDEEGAI
VMLKRHVRQQHALEEYGRNIKQLAARAQSLLSAGHPEGEQIIRLQGQVDKQYAGLKDIAE
ERRRKLENMYHLFQLKREADDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETG
AIGQERVDNVNVVIERLIDAGHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLH
RYFYTGTEILGLIDEKHRELPEDVGLDASTAESFHRVHTAFERELHLLGVQVQQFQDVAG
RLQKAYAGEKAETIQNKEQEVSAAWQALLDACAGRRTQLVDTADKFRFFAMARDLLSWME
GIIRQIETQEKPRDVSSVELLMKYHQGIRAEIDTRSKNFSACLELGGSLLERQHQASEEI
REKLKQVLSRRKELDEKWANRQEQLRMLLEVCKFSRDASVAEAWLIAQEPYLASRDFGHT
VDGVEKLIKRHEAFEKSTATWAERFAALEKPTALELKERQTPERPEEESGPQEEEGETAG
EAPRGPHRAATERTSPGEEERQWPQDLQPPPPPGPQEKSSGDERPATEPLFKVLDTPLSE
GDEPTTLPAQRDHGYSVQMEGYLGRKHDLEGPNKKASNRSWNNLYCVLRNSELTFYKDAK
NLALGVPYHGEEPLALRHAICEIAANYKKKKHVFKLRLSNGSEWLFHGKDEEEMLSWLQG
VSTAINESQSIRIKAQSLPLPSSTGPDASLGKKDKEKRFSFFPKKK
Download sequence
Identical sequences XP_021557010.1.83697

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]