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Domain assignment for XP_022072698.1.10920 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_022072698.1.10920
Domain Number 1 Region: 634-889
Classification Level Classification E-value
Superfamily YWTD domain 3.14e-55
Family YWTD domain 0.00000412
Further Details:      
 
Domain Number 2 Region: 21-281
Classification Level Classification E-value
Superfamily YWTD domain 9.16e-54
Family YWTD domain 0.00000221
Further Details:      
 
Domain Number 3 Region: 333-568
Classification Level Classification E-value
Superfamily YWTD domain 5.62e-52
Family YWTD domain 0.00000366
Further Details:      
 
Domain Number 4 Region: 937-1198
Classification Level Classification E-value
Superfamily YWTD domain 2.62e-39
Family YWTD domain 0.0000389
Further Details:      
 
Domain Number 5 Region: 1327-1365
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000576
Family LDL receptor-like module 0.0011
Further Details:      
 
Domain Number 6 Region: 1248-1288
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000314
Family LDL receptor-like module 0.00078
Further Details:      
 
Domain Number 7 Region: 892-939
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000374
Family EGF-type module 0.014
Further Details:      
 
Domain Number 8 Region: 1289-1324
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000982
Family LDL receptor-like module 0.0016
Further Details:      
 
Domain Number 9 Region: 590-636
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000011
Family EGF-type module 0.0078
Further Details:      
 
Domain Number 10 Region: 288-329
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000205
Family EGF-type module 0.0073
Further Details:      
 
Domain Number 11 Region: 1206-1258
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000525
Family EGF-type module 0.013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_022072698.1.10920
Sequence length 1496
Comment low-density lipoprotein receptor-related protein 6 isoform X1 [Acanthochromis polyacanthus]; AA=GCF_002109545.1; RF=representative genome; TAX=80966; STAX=80966; NAME=Acanthochromis polyacanthus; ecotype=Palm Islands; AL=Scaffold; RT=Major
Sequence
MGVALRSLLLCTFCFLVRGEPLLLYANRRDLRIVDAAHEKSNATVVVGGLEDAAAVDYVF
SQGLIYWSDVSEEAIKRTFFNQSGGGAVQTVVPGLASPDGLACDWLGRKLYWTDSETNRI
EVSELDGSLRKVLFWQELDQPRAIALDPERGFMYWTDWGEIPKIERAGMDGTNRSMIIDK
EIYWPNGLTLDYGQQKLYWADAKHNFIHRCNLDGTSREVVVKGELPHPFALTLYEDTLFW
TDWNTHSIHSCRKQTGAEQRVVHSDIFSPMDIHVFSTKRQPDPVSSSCSLNNGGCSHLCL
LSPVKPFHQCACPTGVQLLEDGRTCRDGATQMLLLARRTDLRRISLDTPDFTDIILQVDD
IRHAIAIDYDPVEGYIYWTDDDVKAIRRSLLDGSDAQFVVTSQVNHPDGIAVDWIARNLY
WTDTGTDRIEVTRLNGTMRKILISEDLDEPRAIVLDPVAGYMYWTDWGEVPKIERADLDG
MERVVMVNTSLGWPNGLALDYDQRKIYWGDAKTDKIEVMNMDGLGRRVLVEDKLPHIFGF
TLLGDYIYWTDWQRRSIERVHKRSAEREFIIDQLPDLMGLKATYVHKTFGTNPCAENNGG
CSHLCLYKPQGVQCGCPIGLELIADMRTCIVPEAFLLFSRHTDIRRISLETNNNNVAIPL
TGVKEASALDFDVTDNRIYWTDITLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKN
LYWADTGTNRIEVAKLDGQHRQVLVWKDLDSPRALALDPAEGYMYWTEWGGKPKIDRAAM
DGTGRITLVADVGRANGLTIDYAERRLYWTDLDTTLIESSNMLGQDREVIADDLPHPFGL
TQYQDYIYWTDWSQRSIERANKTSGQNRTVIQGHLDYVMDILVFHSSRQGGWNACASTNG
HCSHLCLAVPVSSFVCGCPAHFSLNYDNKTCSAPTSFLLFSQKMAINRMVIDEQQSPDII
LPIHSLRNVRAIDYDPLDKQLYWIDSKQNVIRRAQEDGNQSMTVVSSSLSGPNQGLQLYD
LSIDIYSRFIYWTSEVTNVINVTRTDGSRVGVVLRGEHDKPRAIVVNPERGYMYFTNLLE
RSPKIERAALDGTEREVLFFSGLGKPVALAIDNEVGKLFWVDSDLRRIESSDLSGANRIV
IADSNILQPVGLTVFGNHLYWIDKQQQMIERIDKTTREGRTKIQARIAYLSDIHAVHELD
MREYGKHPCTWDNGGCSHICIVKGDGTTRCSCPVHLVLLPDELSCGEPPTCSPEQFSCTS
GEVDCIPQAWRCDGYPECDDSSDEEDCPVCSESEFQCDSRQCIDLSLRCNGEINCQDRSD
ENKCEVRCPADQFTCSNGQCVGKHKKCDHNMDCTDNSDEIGCYPTEEPPQPPNNTISSIV
GVVMALFVVGAIYFVCQRVLCPQMKDDGETVTNDFVVHGPSSVPLGYVPHPSSLSSSLPG
MSRGKSVIGSFSIMGGSGGPPYDRAHVTGASSSSSSSTKGTYFPPVRNHHRPSVEV
Download sequence
Identical sequences XP_022072698.1.10920

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