SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for YP_003155431.1.138 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  YP_003155431.1.138
Domain Number 1 Region: 29-365
Classification Level Classification E-value
Superfamily Release factor 6.28e-119
Family Release factor 0.000000119
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) YP_003155431.1.138
Sequence length 371
Comment peptide chain release factor 2 [Brachybacterium faecium DSM 4810]; AA=GCF_000023405.1; RF=reference genome; TAX=446465; STAX=43669; NAME=Brachybacterium faecium DSM 4810; strain=DSM 4810; AL=Complete Genome; RT=Major
Sequence
MASIDFSAEIPQLRSTLSSIEQVTDIDALDAKIADLEKQASAQDLWDDVDNAQKVSSALS
HAQSERRRISELDSRIEDLEVMVQLAAEEDDADTLEEAENELVSIHKTLDELEVRTLLSG
EYDERDAVITIRAGAGGVDAADFAEMLMRMYLRWAERHGYATKVMDTSHAEEAGLKSVTF
EVSAPFAYGTLSVEGGTHRLVRISPFDNQGRRQTSFAAVEVIPLIESTDSIEIPENDLKV
DVFRSSGPGGQSVNTTDSAVRMTHLPTGTVVSMQDEKSQIQNRAAALRVMQSRLLLLKKA
EEAAERKELAGDVKASWGDQMRSYVLNPYQMVKDLRTDYQEGNPSSVFDGEIDEFIDAGI
RWRAEQGKSDS
Download sequence
Identical sequences A0A1X6XR67 C7ME34
446465.Bfae_20340 gi|257069176|ref|YP_003155431.1| YP_003155431.1.138

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]